PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0066s0022.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB
Protein Properties Length: 335aa    MW: 37549.5 Da    PI: 4.8137
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0066s0022.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding49.78.6e-161461148
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                         +grWT eEd +l ++ +  G g+W+++++  g++R++k+c++rw +yl
  Kaladp0066s0022.1.p 14 KGRWTDEEDAILTRYLQANGEGSWRSVPKNAGLKRCGKSCRLRWINYL 61
                         79********************************************97 PP
2Myb_DNA-binding51.13.2e-1667112148
                          TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                          rg+ T+eE++ ++++++ +G++ W++Ia +++ gRt++++k++w+++l
  Kaladp0066s0022.1.p  67 RGNITPEEEDVIIRLHASMGNR-WSLIAGHLP-GRTDNEIKNYWNSHL 112
                          7999******************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
MVRAPCCEKE GLKKGRWTDE EDAILTRYLQ ANGEGSWRSV PKNAGLKRCG KSCRLRWINY  60
LRPDLKRGNI TPEEEDVIIR LHASMGNRWS LIAGHLPGRT DNEIKNYWNS HLSRKLLTYS  120
TPSKSKATEP IGSAEVTAEW KPRRGRSRHW SSNKNAPVPS DDADLLRSMV ENGELEPITK  180
EKTIEADADE ESFEITEYIN EEGEDNTSSL NADESLIFSS ARGPSYFNEE QSEIFCSFDD  240
ALNIKAEETD VGISSHSLNA SSVDQTDVFK VSKKVDTVAG KWNENKGLSL SSAGDARADW  300
DWKGLINGHK LIDEDEMLSM LWDDGSNFKS NNQL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47460.14e-71MYB family protein