PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0065s0005.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 231aa MW: 26718.4 Da PI: 9.7827 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 93.6 | 8.9e-30 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+ien +nrqvtf+kRrng++KKA+ELSvLCdae+a+++fs++g+lyeys+ Kaladp0065s0005.1.p 9 KKIENPTNRQVTFCKRRNGLMKKAYELSVLCDAEIALMVFSNRGRLYEYSN 59 68***********************************************95 PP | |||||||
2 | K-box | 109.7 | 3.1e-36 | 77 | 174 | 3 | 100 |
K-box 3 kssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenk 92 ++s+ +++ ++a+ +qqe++kL+++i+ Lq+++Rhl+Ge+L+sL++keL+qLe++Le+++++iRskK+e+ll++ie+lqk+e el++e+ Kaladp0065s0005.1.p 77 STSSANTTVTNAQFYQQESTKLRQQIHLLQNTNRHLMGESLGSLNVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREMELENETI 166 45555689999******************************************************************************* PP K-box 93 aLrkklee 100 +Lr+k++e Kaladp0065s0005.1.p 167 CLRAKVAE 174 *****986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence |
MGRGKIEIKK IENPTNRQVT FCKRRNGLMK KAYELSVLCD AEIALMVFSN RGRLYEYSNN 60 NSIKSTIERY KKAYSDSTSS ANTTVTNAQF YQQESTKLRQ QIHLLQNTNR HLMGESLGSL 120 NVKELKQLEN RLERGITRIR SKKHEMLLAE IEYLQKREME LENETICLRA KVAEVERFQQ 180 ANMEAANQEF NTIQAYVARN FFQPDLLQGA DDGSHVNHFT HPDKKIIRLG * |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G09960.1 | 2e-99 | MIKC_MADS family protein |