PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0063s0022.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MYB | ||||||||
Protein Properties | Length: 278aa MW: 30537 Da PI: 7.3011 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 29.6 | 1.6e-09 | 7 | 56 | 3 | 46 |
SS-HHHHHHHHHHHHHTTTT.......-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg.......tWktIartmgkgRtlkqcksrwqk 46 +W+ +Ed + da++ + + +W++Ia+ ++ +++ q+k++++ Kaladp0063s0022.1.p 7 SWSRDEDRAFEDAIATHWVEnledsdeHWEKIAAALP-TKSIHQLKHHYRL 56 7*****************99*****************.***********96 PP | |||||||
2 | Myb_DNA-binding | 40.7 | 5.6e-13 | 126 | 170 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ l++ + ++G+g+W++I+r + +Rt+ q+ s+ qky Kaladp0063s0022.1.p 126 PWTEEEHRLFLLGLDKFGKGDWRSISRNFVITRTPTQVASHAQKY 170 7*****************************99************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 278 aa Download sequence |
MTSSSSSWSR DEDRAFEDAI ATHWVENLED SDEHWEKIAA ALPTKSIHQL KHHYRLLVED 60 VNDIDAGIIP LPEYVGDDAS PSSSSKKSPY IADSNNNNNN SKKGFPGHES KANSNRSEQE 120 RRKGIPWTEE EHRLFLLGLD KFGKGDWRSI SRNFVITRTP TQVASHAQKY FIRLSSMNRD 180 RRRSSIHDIT SVNNGDITTP ITGQPASTNP NGGVPAGPTK HRPPEMGMYG APVGQVVGAP 240 VGHVAAVGTP VMMPPGHHPP YVVPVPYPVA PQPMHQH* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G08520.1 | 7e-63 | MYB family protein |