PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0062s0146.3.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB_related
Protein Properties Length: 289aa    MW: 31442.7 Da    PI: 9.296
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0062s0146.3.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding36.31.3e-11555146
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46
                         +++WT+eE+  l+ +v ++G g W+tI +          R+  ++k++w++
  Kaladp0062s0146.3.p  5 KQKWTAEEESALKAGVVKHGAGKWRTILKDPEfssvlYLRSNVDLKDKWRN 55
                         79***********************************88***********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
MGAPKQKWTA EEESALKAGV VKHGAGKWRT ILKDPEFSSV LYLRSNVDLK DKWRNMSVMA  60
NGWGSREKAR LALKRMQGQS TPKPDENQML LTYGPHSEDE SVDLKPLPSP GVAHQASGSK  120
RTITRLDNLI MEAINELKEP GGSNKTSIGN YIEVKRKYRM PTSQVSPEKK KSPHPSLNLL  180
EGRSRLPSRI DYDNFNLNDI KTTSRAEIDL ELAKMRNMTA EEAAVAAARA VAEAEAAIAE  240
AEEAAREAEA AEADAEAAMA FAEAARKTLK GRSGIKTVCS TVPIAACP*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49950.15e-70MYB_related family protein