PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0062s0091.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | C2H2 | ||||||||
Protein Properties | Length: 185aa MW: 19891.8 Da PI: 6.8794 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 15.8 | 3.9e-05 | 34 | 56 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C++ F++ L H+++H Kaladp0062s0091.1.p 34 FECTYCKRGFTNAQALGGHMNLH 56 89*******************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 185 aa Download sequence |
MAEAGKQLRS SGSSSDESDP AKDEGAAGAV RRSFECTYCK RGFTNAQALG GHMNLHRKDR 60 AKAKQTSVAA KKVSSYADDP NCGMSYRQIA PMSSSTADIG YANWEAQRMI SSHHTHRPAA 120 VLNSPAGGYP GPIIGTGLEL RPNLSLRVGS ASSNYVAWNN NIEDDHEEDN KDEDVDLELR 180 LGHR* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G53820.1 | 4e-14 | C2H2 family protein |