PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0062s0022.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MYB | ||||||||
Protein Properties | Length: 298aa MW: 33036.5 Da PI: 6.957 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 47.7 | 3.7e-15 | 30 | 77 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd l+++++ G g+W+ a++ g++Rt+k+c++rw++yl Kaladp0062s0022.1.p 30 RGPWTIEEDSMLIHYIACNGEGRWNMLAKCAGLKRTGKSCRLRWLNYL 77 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 50.3 | 5.5e-16 | 83 | 126 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ +++E++l+++++ ++G++ W++Ia++++ gRt++++k++w++ Kaladp0062s0022.1.p 83 RGNLSPQEQLLILELHSKWGNR-WSKIAQHLP-GRTDNEIKNFWRT 126 7899******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 298 aa Download sequence |
MSGGSVTNNG QGTKTSSMSN IEEDEAELRR GPWTIEEDSM LIHYIACNGE GRWNMLAKCA 60 GLKRTGKSCR LRWLNYLKPD VKRGNLSPQE QLLILELHSK WGNRWSKIAQ HLPGRTDNEI 120 KNFWRTRVQK QARRLNPDTT ADHQQLALPA FSQTNSSASS LAMSAQEHNI IPNVSNMSPP 180 RSWHHIFSPN HATTLLGESS SSSFPQPGVA DHHQTTTTTS PGNVITYGNS LYMDNGGNPL 240 FHNEGCYYVD NTHAADASGG FGLGDASVAP SGRRDWVLDD EVANSMWNNT DELWQFR* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68320.1 | 2e-71 | MYB family protein |