PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0061s0173.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 390aa MW: 43746.9 Da PI: 7.6874

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0061s0173.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.4	1.1e-15	143	188	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v+ +G+ +W++Ia+++ gR++k+c++rw++ Kaladp0061s0173.1.p 143 RGHWRPAEDAKLKELVAFYGPQNWNLIAEKLE-GRSGKSCRLRWFNQ 188 899***************************.*********996 PP
2	Myb_DNA-binding	53.3	6.2e-17	195	238	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r +++++E+e+l a++ +G++ W+ Iar ++ gRt++++k++w+ Kaladp0061s0173.1.p 195 RRAFSEDEEERLMAAHRAYGNK-WAMIARLFP-GRTDNSVKNHWHV 238 678*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 390 aa Download sequence
MKAMANNKCV IPPGFYADSS FTNGGGVGLI SHYHHHHHHN PSMGLMFQGM GSLSLDLNSS 60 SNPPSAQESL ASKRPDKQME FPASEAGEEN CKGSSDYSDD RVCGSSREFV DLNASLVEDD 120 TETTCHGNNK DAAESGPSKF FTRGHWRPAE DAKLKELVAF YGPQNWNLIA EKLEGRSGKS 180 CRLRWFNQLD PRINRRAFSE DEEERLMAAH RAYGNKWAMI ARLFPGRTDN SVKNHWHVIM 240 ARKYREQSTA YRRRKLSQTI YRKIEDRQNP TPPPPPPCTG FCLPHPAHPF SPNNFAVPAS 300 YNNCNNSVLL HAHHLHQQQQ ISFELMSGSK NRDMMMHMMM FDGPSYTHQN QQQADNNINQ 360 ISPDPLNSSP APPPSQPPLF IDFLGVGAM*

Sequence ? help Back to Top

Protein Sequence Length: 390 aa Download sequence

MKAMANNKCV IPPGFYADSS FTNGGGVGLI SHYHHHHHHN PSMGLMFQGM GSLSLDLNSS  60
SNPPSAQESL ASKRPDKQME FPASEAGEEN CKGSSDYSDD RVCGSSREFV DLNASLVEDD  120
TETTCHGNNK DAAESGPSKF FTRGHWRPAE DAKLKELVAF YGPQNWNLIA EKLEGRSGKS  180
CRLRWFNQLD PRINRRAFSE DEEERLMAAH RAYGNKWAMI ARLFPGRTDN SVKNHWHVIM  240
ARKYREQSTA YRRRKLSQTI YRKIEDRQNP TPPPPPPCTG FCLPHPAHPF SPNNFAVPAS  300
YNNCNNSVLL HAHHLHQQQQ ISFELMSGSK NRDMMMHMMM FDGPSYTHQN QQQADNNINQ  360
ISPDPLNSSP APPPSQPPLF IDFLGVGAM*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26780.1	3e-74	MYB family protein