PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0061s0032.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 701aa MW: 78552 Da PI: 5.4401

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0061s0032.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	40.2	7.9e-13	65	105	7	48
HHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 7 eEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 Ede+++++v + G W+ Ia++++ gR +kqc++rw+ +l Kaladp0061s0032.1.p 65 KEDEKIIELVGKNGATKWTNIAKHLP-GRIGKQCRERWYHHL 105 6***********************.**********886 PP
2	Myb_DNA-binding	47.3	4.8e-15	111	153	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 + +WT+eE++ l++a++ +G++ W+ + ++ gR+++ +k++w+ Kaladp0061s0032.1.p 111 KENWTQEEELTLIHAHRIYGNK-WAELTKFLP-GRSDNAIKNHWN 153 679*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 701 aa Download sequence
MGLPKSDLRI GLVDLLGVRP RGSGQLKRMK LCGRQLNIIM ARVGKKIAEC LGGRTDVQCL 60 HRWQKEDEKI IELVGKNGAT KWTNIAKHLP GRIGKQCRER WYHHLDPAIK KENWTQEEEL 120 TLIHAHRIYG NKWAELTKFL PGRSDNAIKN HWNSSVKKKE ESFMAAGLLS NFPGVPDFGQ 180 QKLSVAFSST QQTSGENSHM RGGSEEDGVL ECSQASTTLG CSQTSNDLTI KVESLNPIQE 240 CHKNSLVDGN HSLSCNVGLD EIGDPMLSQS SHIQISQANE TSDLPSNDPA SDYLDIPSFE 300 HLFYDEPNQC QNSFPETQGQ DFYQSTHDDF SYINQYDMNP TEIASENKVV YEESESGSHR 360 IHAMAKSPDK SQCCTPMEVQ PALVHGEKIN NGGAAYYEPP HLTNLDIPFV SCDLVKSGDF 420 LEEEYSPLGI RQLLLMNSFS PLRLWDDSPE AGLKSGTKTF TRTPSILKKR HRDLLSPLSE 480 KRVDKKQDSE PEQNSFSGLA QDTSQFNDNR KENFDPVLKT VEKDQTEGLS YERVLEDINR 540 DPKAHLDAND AVHQSSEDLA DKEIEKLILF SPRVQIQAEK ELYAKGYLNL TSLPGNSNES 600 DRYTANEIIS FHTHSLTPRL RGIMVKKPFI DADSDKSSRS EGTPFKIFFE SPTLDSPLFA 660 KLFLPGPRID TDISIEDIGY LITPDSKSYD AIGIMKKLSE *

Sequence ? help Back to Top

Protein Sequence Length: 701 aa Download sequence

MGLPKSDLRI GLVDLLGVRP RGSGQLKRMK LCGRQLNIIM ARVGKKIAEC LGGRTDVQCL  60
HRWQKEDEKI IELVGKNGAT KWTNIAKHLP GRIGKQCRER WYHHLDPAIK KENWTQEEEL  120
TLIHAHRIYG NKWAELTKFL PGRSDNAIKN HWNSSVKKKE ESFMAAGLLS NFPGVPDFGQ  180
QKLSVAFSST QQTSGENSHM RGGSEEDGVL ECSQASTTLG CSQTSNDLTI KVESLNPIQE  240
CHKNSLVDGN HSLSCNVGLD EIGDPMLSQS SHIQISQANE TSDLPSNDPA SDYLDIPSFE  300
HLFYDEPNQC QNSFPETQGQ DFYQSTHDDF SYINQYDMNP TEIASENKVV YEESESGSHR  360
IHAMAKSPDK SQCCTPMEVQ PALVHGEKIN NGGAAYYEPP HLTNLDIPFV SCDLVKSGDF  420
LEEEYSPLGI RQLLLMNSFS PLRLWDDSPE AGLKSGTKTF TRTPSILKKR HRDLLSPLSE  480
KRVDKKQDSE PEQNSFSGLA QDTSQFNDNR KENFDPVLKT VEKDQTEGLS YERVLEDINR  540
DPKAHLDAND AVHQSSEDLA DKEIEKLILF SPRVQIQAEK ELYAKGYLNL TSLPGNSNES  600
DRYTANEIIS FHTHSLTPRL RGIMVKKPFI DADSDKSSRS EGTPFKIFFE SPTLDSPLFA  660
KLFLPGPRID TDISIEDIGY LITPDSKSYD AIGIMKKLSE *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32730.1	2e-65	MYB family protein