PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0060s0493.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 412aa MW: 45960 Da PI: 4.905

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0060s0493.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.6	1.6e-11	242	284	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 +ErrRR+r+N++++ Lr+++Pk + K++ +iL ++eY+k+L Kaladp0060s0493.1.p 242 LAERRRRKRLNDRLSLLRSIVPKiS------KMDRTSILGDTIEYMKEL 284 58*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 412 aa Download sequence
MEISEEDFLQ ELLALRRSSQ TSSWDSTTST PTFSTHMTHN NNVVPNANNF ITTTNNTVWS 60 NNNSSFQITS SSSSPWDPPM DPQTFSTNHP PPFDQAFHNP TPRFPSSQHH HPQLCSSAEH 120 HPHMMEEDET ASLFLVQHDG GGLYYNPFSG FEDHHYHQAD LASSLLDEDQ SAMMMMMMMQ 180 SDTQSLKIEP SAAATPSSDL LAVPSHVFNV GCGGSDFSER KSGGGGGKAS KKVQGQPSKN 240 LLAERRRRKR LNDRLSLLRS IVPKISKMDR TSILGDTIEY MKELLERIQS LQDELDLDHH 300 SDDQVFLVDL FQDLKPNEVQ IRNTPKFEVE RRNPKDTRVE ICCSGKPGLL LSTVNTMEAL 360 GLEIEQCVIS CFNDFAMHAS CSEDVDTGNE TDCEEIKQAL FRNAGYGGQC L*

Sequence ? help Back to Top

Protein Sequence Length: 412 aa Download sequence

MEISEEDFLQ ELLALRRSSQ TSSWDSTTST PTFSTHMTHN NNVVPNANNF ITTTNNTVWS  60
NNNSSFQITS SSSSPWDPPM DPQTFSTNHP PPFDQAFHNP TPRFPSSQHH HPQLCSSAEH  120
HPHMMEEDET ASLFLVQHDG GGLYYNPFSG FEDHHYHQAD LASSLLDEDQ SAMMMMMMMQ  180
SDTQSLKIEP SAAATPSSDL LAVPSHVFNV GCGGSDFSER KSGGGGGKAS KKVQGQPSKN  240
LLAERRRRKR LNDRLSLLRS IVPKISKMDR TSILGDTIEY MKELLERIQS LQDELDLDHH  300
SDDQVFLVDL FQDLKPNEVQ IRNTPKFEVE RRNPKDTRVE ICCSGKPGLL LSTVNTMEAL  360
GLEIEQCVIS CFNDFAMHAS CSEDVDTGNE TDCEEIKQAL FRNAGYGGQC L*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	244	251	ERRRRKRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65640.1	3e-63	bHLH family protein