PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0060s0471.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MYB | ||||||||
Protein Properties | Length: 378aa MW: 42488.9 Da PI: 7.0173 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 57.7 | 2.6e-18 | 66 | 113 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd l +++++G g+W++ ar+ g++Rt+k+c++rw++yl Kaladp0060s0471.1.p 66 RGPWTVEEDHTLMSYIAKHGEGRWNSLARCAGLKRTGKSCRLRWLNYL 113 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 51 | 3.4e-16 | 119 | 162 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T eE++l+++++ ++G++ W++Ia++++ gRt++++k++w++ Kaladp0060s0471.1.p 119 RGNITLEEQLLILELHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 162 7999******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 378 aa Download sequence |
MEGYMNGRSV AAEKQQQYYS NMSSLVGGGG VAMSSNSNNQ NHHKVQSSSS GEEEEDEMGM 60 MMDLRRGPWT VEEDHTLMSY IAKHGEGRWN SLARCAGLKR TGKSCRLRWL NYLRPDVRRG 120 NITLEEQLLI LELHSRWGNR WSKIAQHLPG RTDNEIKNYW RTRVQKHAKQ LKCDVNSKQF 180 KDTMRYLWMP RLVERIQAAA AANGASSPRN PLNHTLPNLT APIHHHHHHN LIIPPTTAPS 240 HHFTSSSYVC SDNSSTTAAS SDSFGAQVSP ASDMAEDYQM PGSCYNLNNN VDYFTGSNNG 300 GQICYSDSLI SPAGYYHPQA ADFPSMEQHS SNNQNSSGLI SNNLNQWLVE GGDLSDNMWN 360 VEDIWLLQQQ QLNNNNY* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G49620.1 | 2e-81 | MYB family protein |