PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0060s0433.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

Trihelix

Protein Properties

Length: 416aa MW: 46520.2 Da PI: 5.4293

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0060s0433.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	81.7	9.9e-26	308	392	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W ++e++aLi++r +e ++++ +k + W+evs+++ g++rs+k+Ckekwen+nk+++++k++ + + +ss+tcpyf++l+ Kaladp0060s0433.1.p 308 KWLRDEIQALIQLRGGLEMNFSSMGSKCTIWDEVSARLLGMGYRRSAKKCKEKWENMNKYFRRVKTNGITK-RNSSKTCPYFQELD 392 7***************************************************************99986.88999*****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 416 aa Download sequence
MEVFSGEVRM RASDHFPDQI SPFPSSFDSL FAGSEVTVPS PDITPFPPQK LRPIRCNGKS 60 AADCATDPAV SAFGEFRVAS GQGSLGAGFG EVGFVSDFRN EYVEGAGSVG AGCVGGGGVR 120 PVADARIGKD EFEGQSLPPD SRSESEVSGE LLEHAQGSNN RKSRGRKGKR WEGLMQKLIS 180 KVLVKQEAMH KQIMEAIERN ERERLMREEA WKQQQMEWMR RDEQMRAEET SRNVALISFI 240 QNVIDQDFQL PEPLQMYNLP NDEGEVDHQR DIVCDGTDDR LHTSEKDDFP GTKYPPPQEI 300 SLSADNRKWL RDEIQALIQL RGGLEMNFSS MGSKCTIWDE VSARLLGMGY RRSAKKCKEK 360 WENMNKYFRR VKTNGITKRN SSKTCPYFQE LDILCKQGII SPPCNPSDTN CGDLS*

Sequence ? help Back to Top

Protein Sequence Length: 416 aa Download sequence

MEVFSGEVRM RASDHFPDQI SPFPSSFDSL FAGSEVTVPS PDITPFPPQK LRPIRCNGKS  60
AADCATDPAV SAFGEFRVAS GQGSLGAGFG EVGFVSDFRN EYVEGAGSVG AGCVGGGGVR  120
PVADARIGKD EFEGQSLPPD SRSESEVSGE LLEHAQGSNN RKSRGRKGKR WEGLMQKLIS  180
KVLVKQEAMH KQIMEAIERN ERERLMREEA WKQQQMEWMR RDEQMRAEET SRNVALISFI  240
QNVIDQDFQL PEPLQMYNLP NDEGEVDHQR DIVCDGTDDR LHTSEKDDFP GTKYPPPQEI  300
SLSADNRKWL RDEIQALIQL RGGLEMNFSS MGSKCTIWDE VSARLLGMGY RRSAKKCKEK  360
WENMNKYFRR VKTNGITKRN SSKTCPYFQE LDILCKQGII SPPCNPSDTN CGDLS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G47660.1	1e-35	Trihelix family protein