PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0060s0189.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MYB | ||||||||
Protein Properties | Length: 378aa MW: 40727.7 Da PI: 9.8468 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 61.9 | 1.3e-19 | 81 | 126 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEdell +v+++G ++W++I+r ++ gR++k+c++rw + Kaladp0060s0189.1.p 81 KGPWSPEEDELLQSLVEKHGARNWSLISRAIP-GRSGKSCRLRWCNQ 126 79******************************.***********985 PP | |||||||
2 | Myb_DNA-binding | 54.4 | 2.8e-17 | 133 | 177 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r ++T+eEde +++a+++ G++ W+tIar ++ gRt++ +k++w++ Kaladp0060s0189.1.p 133 RRPFTAEEDEVILRAHARVGNR-WATIARLLN-GRTDNAVKNHWNST 177 679*******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 378 aa Download sequence |
MQRGNGSAAD ACPSSQLYPK IPPLTHSTAF PQRCQRQRRV YNRRRVRESR DPTDSIHPRS 60 KVSTLNRSMA SGGGVLGEKI KGPWSPEEDE LLQSLVEKHG ARNWSLISRA IPGRSGKSCR 120 LRWCNQLSPE VERRPFTAEE DEVILRAHAR VGNRWATIAR LLNGRTDNAV KNHWNSTLKR 180 KCPWIVEDHT TGGGGGELKR SVSAGAAASP SGSDASDSSV HILSSIPAGR KTVGGLLWLG 240 GNETASYGDD GVATELSLSL SMPGAESSQS SGGQPQLIEF GKQPQPEPAV KMGDVTTELG 300 LAAVGSQESR KEKEKEKEEE IIGGSGSQPL TTEFWGTMRE MIRKEVRSYM SGGGVNGGGV 360 CARGDMAMTR IRIGRSD* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37260.1 | 3e-63 | MYB family protein |