PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0060s0097.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

C2H2

Protein Properties

Length: 473aa MW: 50206.5 Da PI: 8.6945

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0060s0097.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.8	2e-05	57	79	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H Kaladp0060s0097.1.p 57 FVCEICSKGFQRDQNLQLHRRGH 79 89*******************88 PP
2	zf-C2H2	13.2	0.00027	133	155	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H + + Kaladp0060s0097.1.p 133 WKCEKCSKKYAVQSDWKAHAKIC 155 58*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 473 aa Download sequence
MAASGASGGD ASVSSSGEQP AVKLAAVKKK RNLPGMPDPD AEVIALSPKT LMATNRFVCE 60 ICSKGFQRDQ NLQLHRRGHN LPWKLRQRTS KDVKKRVYVC PETSCVHHDP SRALGDLTGI 120 KKHFCRKHGE KKWKCEKCSK KYAVQSDWKA HAKICGTREY KCDCGTLFCR RDSFITHRAF 180 CDALAEESAK ATETQAPKLN RKSLHLTDDP KNQNAAANGS SQPAPTSDDV LSEAADSGVR 240 ITEEEQPSEV AAGLTGSCNV SSNSSPSSAM FASLLASSST DLFRTVAHPH GHVAPDFAPQ 300 ASTEPVSLCL SHNQGLASSF GAAGQEHRQY APLPQAAMSA TALLQKAAQM GSSASSASLL 360 RGLGVTASSP SSTRQQETFP WSRRQMEQEG RSIQAGLCLG LPTNGSPGFK DMMLGHSSMF 420 SPKQATLDLL GLGMAASGNP NGGISALLTS LGGNLDVDAP FRNGDIAEKD IR*

Sequence ? help Back to Top

Protein Sequence Length: 473 aa Download sequence

MAASGASGGD ASVSSSGEQP AVKLAAVKKK RNLPGMPDPD AEVIALSPKT LMATNRFVCE  60
ICSKGFQRDQ NLQLHRRGHN LPWKLRQRTS KDVKKRVYVC PETSCVHHDP SRALGDLTGI  120
KKHFCRKHGE KKWKCEKCSK KYAVQSDWKA HAKICGTREY KCDCGTLFCR RDSFITHRAF  180
CDALAEESAK ATETQAPKLN RKSLHLTDDP KNQNAAANGS SQPAPTSDDV LSEAADSGVR  240
ITEEEQPSEV AAGLTGSCNV SSNSSPSSAM FASLLASSST DLFRTVAHPH GHVAPDFAPQ  300
ASTEPVSLCL SHNQGLASSF GAAGQEHRQY APLPQAAMSA TALLQKAAQM GSSASSASLL  360
RGLGVTASSP SSTRQQETFP WSRRQMEQEG RSIQAGLCLG LPTNGSPGFK DMMLGHSSMF  420
SPKQATLDLL GLGMAASGNP NGGISALLTS LGGNLDVDAP FRNGDIAEKD IR*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50700.1	1e-105	C2H2 family protein