PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0060s0074.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

HB-other

Protein Properties

Length: 1088aa MW: 122276 Da PI: 8.4647

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0060s0074.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	39.7	8e-13	10	59	8	57
-HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 8 tkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 t+ qle Le++++k+ryp+++e++ A++l+Lt +qV+ WF rR kek+ Kaladp0060s0074.1.p 10 TPLQLELLEQFYAKERYPTQSEMKNYAASLRLTLKQVRGWFVERRRKEKR 59 889**********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 1088 aa Download sequence
MEAGKPCVKT PLQLELLEQF YAKERYPTQS EMKNYAASLR LTLKQVRGWF VERRRKEKRE 60 KGGSELTSAY YAEKFRSICR SRETGKLSYP AIATINKPFR VQDRLWTPDY IISKILRKDG 120 PALGADFDSI PDRSSSESPA SRFAGQEAQG SPKRRKVCKR QDCNGKEVPG KKHGVGKGLI 180 TAWRVANPGA GCYPTGIGCD LVPSIASSQK LSVKRKQLKR PRPLRKDNCL GNKKQEKKAR 240 VPLQRRKQVV HKLTGRKECG LAVEEIASRE QHDLFGDLID DEELELKELQ AGPNPVTCSA 300 HFATSTLHRC SFCKDLLSKF PPVSLKMKQP FCIQPWHSSP EMVKQLFKVV HFLYTYAAVF 360 DIRPFTVDDF AQAFHDKDSL LLVEVHLSLL KFLLSDIKRE LSNGFPLQYS TSCKFLRLLQ 420 AVRHQDSVVD AWSRFLNPLT WTEILRQIFV AAGYGSKHSI SSKELQSKRE VNPMVKYGLA 480 PGTLKGELFG ILSHQGNKGL KVSELARSTQ IGALELNCTM DALELLISSA LSSDITLFEK 540 ISPSAYRLRI SFTEENFQPD IEYSGTINDC SMNTVMDSSS DSEHDSGNSS LSQVDRQSWR 600 RKQKASRLSV DNEIDESHPG EVWLLGLAES EYSNLRIEEK LNALVALVDL LRSISCFRYE 660 KEKECGRDTF PRRLHYGSGA KIKRSTVKQN LTRPSWASLD QMHTRGDHPV DSSTSASKFL 720 LNEGSSSKKN GPVEAGDGFN SHPMQSVFLG SDRRYNQYWL FLGPCSDSDP GHRRIYFESS 780 EDGHWEVIDS EEAFGVLRSV LDNRGTREAF LCASLQKRER CLLQGMSSGN GISSGCRDGE 840 ACDQNLISQD SCSPVSDVDN TLSCCDSRNT PLALSGAINL QKGDYQKQNW YKLQAFDKWT 900 WNSFYTTLNA VKYYRRSYLG SLARCEACHD LYWRDEKHCK VCHTTFELHF DLEEKYAIHV 960 ATCKAMGEND CSPTHKVLSS QLQSLKAAVY AVESAMPEDS LTGSWRQSAH NLWSKRLRRT 1020 SSLAELLQVL TDFVGAINED WVSACSAAAD SSSICEEVIK SFPPFPQTSA AVALWLVKLD 1080 ALIAPFL*

Sequence ? help Back to Top

Protein Sequence Length: 1088 aa Download sequence

MEAGKPCVKT PLQLELLEQF YAKERYPTQS EMKNYAASLR LTLKQVRGWF VERRRKEKRE  60
KGGSELTSAY YAEKFRSICR SRETGKLSYP AIATINKPFR VQDRLWTPDY IISKILRKDG  120
PALGADFDSI PDRSSSESPA SRFAGQEAQG SPKRRKVCKR QDCNGKEVPG KKHGVGKGLI  180
TAWRVANPGA GCYPTGIGCD LVPSIASSQK LSVKRKQLKR PRPLRKDNCL GNKKQEKKAR  240
VPLQRRKQVV HKLTGRKECG LAVEEIASRE QHDLFGDLID DEELELKELQ AGPNPVTCSA  300
HFATSTLHRC SFCKDLLSKF PPVSLKMKQP FCIQPWHSSP EMVKQLFKVV HFLYTYAAVF  360
DIRPFTVDDF AQAFHDKDSL LLVEVHLSLL KFLLSDIKRE LSNGFPLQYS TSCKFLRLLQ  420
AVRHQDSVVD AWSRFLNPLT WTEILRQIFV AAGYGSKHSI SSKELQSKRE VNPMVKYGLA  480
PGTLKGELFG ILSHQGNKGL KVSELARSTQ IGALELNCTM DALELLISSA LSSDITLFEK  540
ISPSAYRLRI SFTEENFQPD IEYSGTINDC SMNTVMDSSS DSEHDSGNSS LSQVDRQSWR  600
RKQKASRLSV DNEIDESHPG EVWLLGLAES EYSNLRIEEK LNALVALVDL LRSISCFRYE  660
KEKECGRDTF PRRLHYGSGA KIKRSTVKQN LTRPSWASLD QMHTRGDHPV DSSTSASKFL  720
LNEGSSSKKN GPVEAGDGFN SHPMQSVFLG SDRRYNQYWL FLGPCSDSDP GHRRIYFESS  780
EDGHWEVIDS EEAFGVLRSV LDNRGTREAF LCASLQKRER CLLQGMSSGN GISSGCRDGE  840
ACDQNLISQD SCSPVSDVDN TLSCCDSRNT PLALSGAINL QKGDYQKQNW YKLQAFDKWT  900
WNSFYTTLNA VKYYRRSYLG SLARCEACHD LYWRDEKHCK VCHTTFELHF DLEEKYAIHV  960
ATCKAMGEND CSPTHKVLSS QLQSLKAAVY AVESAMPEDS LTGSWRQSAH NLWSKRLRRT  1020
SSLAELLQVL TDFVGAINED WVSACSAAAD SSSICEEVIK SFPPFPQTSA AVALWLVKLD  1080
ALIAPFL*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	53	58	RRRKEK
2	53	60	RRRKEKRE
3	219	223	KRPRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12750.1	0.0	HB-other family protein