PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0060s0042.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family SRS
Protein Properties Length: 305aa    MW: 32373.4 Da    PI: 8.2261
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0060s0042.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF702215.61.2e-66852343153
               DUF702   3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrel.kskkqsalsstkl 91 
                           g++sCqdCGnqakkdCah+RCRtCC+srgf+C+thvkstWv+a  rrerqq+l++++++   +++++ skr re    +++sal + + 
  Kaladp0060s0042.1.p  85 GGSISCQDCGNQAKKDCAHSRCRTCCRSRGFECQTHVKSTWVAAPVRRERQQKLSQQQQNPLLRSSSEGSKRLREAgGPSSSSALVHHR- 173
                          5789********************************************************99999999999999982333333444444. PP

               DUF702  92 ssaeskkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGle 153
                           + +s+ +   +++P+evs++avfrcvrvs++d+ge+++aYqtavsigGhvfkG+LydqGl+
  Kaladp0060s0042.1.p 174 -NPSSTGMEVGRTFPAEVSAQAVFRCVRVSAIDEGEDQYAYQTAVSIGGHVFKGLLYDQGLD 234
                          .333344445566***********************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MAGLGGGRDR SSSQHHQQAA GAGAPPESWF LYRNPDELSS YRGFELWQQQ QQHQPRNNPS  60
SFGLGIGPDE PQLPTGFAMT RSAGGGSISC QDCGNQAKKD CAHSRCRTCC RSRGFECQTH  120
VKSTWVAAPV RRERQQKLSQ QQQNPLLRSS SEGSKRLREA GGPSSSSALV HHRNPSSTGM  180
EVGRTFPAEV SAQAVFRCVR VSAIDEGEDQ YAYQTAVSIG GHVFKGLLYD QGLDPSSYTP  240
GDSSSVGGGG SSSGGGGGGI QQLNFMSGGA AEATAFIDPS SMYHQSSHSN PFLPSGTQFF  300
PPQR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G51060.16e-59SRS family protein