PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0060s0038.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | DBB | ||||||||
Protein Properties | Length: 180aa MW: 19736.3 Da PI: 6.6025 | ||||||||
Description | DBB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 23.5 | 1.1e-07 | 4 | 33 | 5 | 34 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeH 34 +C+ +e ++lfC ++ lC++C ++ H Kaladp0060s0038.1.p 4 ICDVCEGAAAILFCAADEAALCQSCDDKVH 33 8******99******************998 PP | |||||||
2 | zf-B_box | 28.5 | 3.3e-09 | 54 | 92 | 4 | 38 |
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg....Ht 38 +C+ +e+ ++ ++Ce +++ lC +C + H g H+ Kaladp0060s0038.1.p 54 ARCDICENAPAFFYCEVDGTSLCLQCDMIVHVGgkrtHE 92 69**************************99966666776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 180 aa Download sequence |
MRSICDVCEG AAAILFCAAD EAALCQSCDD KVHMCNKLAS RHVRVRLAAP SAVARCDICE 60 NAPAFFYCEV DGTSLCLQCD MIVHVGGKRT HERYLILRQK VEFQGDKPGL LEDPASQPLE 120 TGESNEGPKN STRDNQQNHV SSPVPIIDSN GDSHVKRDTK MIDLNMKPQR IHKQASNNQ* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38960.1 | 1e-74 | DBB family protein |