PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0059s0339.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 383aa MW: 43251.6 Da PI: 6.7325

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0059s0339.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.2	9.2e-19	73	120	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEd l +++++G g+W++ ar+ g++Rt+k+c++rw++yl Kaladp0059s0339.1.p 73 RGPWTAEEDHTLMSYIAKHGEGRWNSLARCAGLKRTGKSCRLRWLNYL 120 89********************************************97 PP
2	Myb_DNA-binding	50.9	3.5e-16	126	169	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T eE++l+++++ ++G++ W++Ia++++ gRt++++k++w++ Kaladp0059s0339.1.p 126 RGNITLEEQLLILELHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 169 7999****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 383 aa Download sequence
MDGYMNGRAV AAEGLLSHHL QQERERYYSN MSSSGGGGGA LSSGNSNNQH KVQSSSSGEE 60 EDDEMAMMMD LRRGPWTAEE DHTLMSYIAK HGEGRWNSLA RCAGLKRTGK SCRLRWLNYL 120 RPDVRRGNIT LEEQLLILEL HSRWGNRWSK IAQHLPGRTD NEIKNYWRTR VQKHAKQLKC 180 DVNSKQFQDT MRYLWMPRLV ERIQAANGAA SSAQINPHNP LNHTLSNLTN PILHHHPDMI 240 MPPAASAPPR SHHHFTNSSY VGSENSSTTA ASSDSFGAQV SPVSDMSENY YMPASYNLNN 300 NVAYFNGGQI GYSDSLISPA GYYHPQAPDF QSTEYNCNNH NSDVVSNNLD QWVMDGGDLP 360 DNMWNVEDIW HLQQQQFNNN YY*

Sequence ? help Back to Top

Protein Sequence Length: 383 aa Download sequence

MDGYMNGRAV AAEGLLSHHL QQERERYYSN MSSSGGGGGA LSSGNSNNQH KVQSSSSGEE  60
EDDEMAMMMD LRRGPWTAEE DHTLMSYIAK HGEGRWNSLA RCAGLKRTGK SCRLRWLNYL  120
RPDVRRGNIT LEEQLLILEL HSRWGNRWSK IAQHLPGRTD NEIKNYWRTR VQKHAKQLKC  180
DVNSKQFQDT MRYLWMPRLV ERIQAANGAA SSAQINPHNP LNHTLSNLTN PILHHHPDMI  240
MPPAASAPPR SHHHFTNSSY VGSENSSTTA ASSDSFGAQV SPVSDMSENY YMPASYNLNN  300
NVAYFNGGQI GYSDSLISPA GYYHPQAPDF QSTEYNCNNH NSDVVSNNLD QWVMDGGDLP  360
DNMWNVEDIW HLQQQQFNNN YY*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G49620.1	2e-83	MYB family protein