PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0059s0317.3.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | CO-like | ||||||||
Protein Properties | Length: 407aa MW: 44501 Da PI: 7.0115 | ||||||||
Description | CO-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 19.8 | 1.7e-06 | 3 | 44 | 4 | 39 |
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 r+C+ ++e++ +C++++ +lC +C + H+ H++ Kaladp0059s0317.3.p 3 RMCDFCGEQRSMVYCRSDSACLCLSCDRNVHSAnalsnrHSR 44 68*****************************65677777765 PP | |||||||
2 | zf-B_box | 25.4 | 3e-08 | 46 | 89 | 4 | 41 |
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41 C+++ +++++ C+d + lC++C ++H + H++++ Kaladp0059s0317.3.p 46 LLCERCMSQPAIVRCHDESASLCQNCDWSGHGNasvtstHQRQT 89 57*****************************6688888888766 PP | |||||||
3 | CCT | 63.5 | 6.4e-22 | 349 | 392 | 1 | 44 |
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 R++a++RYkeK+k+RkF+KkirY+sRK++A+ R+RvKGrFvk+ Kaladp0059s0317.3.p 349 RDNAVRRYKEKKKHRKFDKKIRYASRKERADVRKRVKGRFVKAG 392 899**************************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 407 aa Download sequence |
MGRMCDFCGE QRSMVYCRSD SACLCLSCDR NVHSANALSN RHSRTLLCER CMSQPAIVRC 60 HDESASLCQN CDWSGHGNAS VTSTHQRQTI NCYSGCPSAA ELSRIWSFVL DMASTGALDG 120 EKGAGSVAET CAGLTNLERK SSASLADASR IVELESKSAV LMPSSTMGAP KSTTLFKELP 180 TPPKQCCSIT EDIQLFDDDD NLFGDFSMAD ADLNLESYEE LFGYSQNFSE HLFENGGMAS 240 LFPERYIPEV GTSRQGPKAA KGPAAVRTNT MQPSCSNPMS VDSVVSCKTD PVAYPTRKDN 300 SGVTLSFSGM TNESSNGEYQ DCGVSPMVAI GEPPWCPPGL ENSLTSASRD NAVRRYKEKK 360 KHRKFDKKIR YASRKERADV RKRVKGRFVK AGEKYDYDPM CPTRSF* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 361 | 370 | KHRKFDKKIR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G48250.1 | 1e-116 | CO-like family protein |