PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0059s0244.3.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family GRAS
Protein Properties Length: 546aa    MW: 61159.4 Da    PI: 4.8989
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0059s0244.3.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS446.22.1e-1361765452374
                 GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPil 91 
                          ++lL++cA  +++g+l++a+a++++l++l+s +gdp +R+aay++e+Laar+a+s++ lykal+++e +   ++++laa+++++ev+P++
  Kaladp0059s0244.3.p 176 KQLLIHCASIIAEGKLREASAMINELRQLVSIQGDPHERIAAYMVEGLAARMAESGQCLYKALKCKEPP---TTDRLAAMQILFEVCPCF 262
                          589*****************************************************************9...9***************** PP

                 GRAS  92 kfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefn 179
                          kf++++aN  I+ea+  e+rvHiiDfdi+qG Q+++L+q+LasR++  p+lR+Tgv++pes+  s   l+ +g rL+++Ae+l++pfef+
  Kaladp0059s0244.3.p 263 KFGYMAANGVIMEAIRDEKRVHIIDFDINQGNQYITLIQTLASRKGRRPHLRLTGVDDPESVqrSVGGLKIIGLRLEQLAEALELPFEFH 352
                          ************************************************************9989999*********************** PP

                 GRAS 180 vlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfd 269
                          + va++++d+++++L+ +p+E+l+Vn+++qlh+++desvs+ ++rd++L+ +k+l Pk+v+vveq++++n+++F+ rf+ea +yysa+f+
  Kaladp0059s0244.3.p 353 A-VASATSDVTPDMLDHRPDEVLIVNFAFQLHHMPDESVSTVNQRDQLLRKIKGLHPKLVTVVEQDVNTNTSPFFPRFIEAYNYYSAVFE 441
                          *.7*************************************************************************************** PP

                 GRAS 270 sleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslv 359
                          sl+a+l+r+s++ri+vEr++l+r+ivn+vaceg+er+er e ++kWr+r+++aGF+++p+s++++++++ l+rk+ ++ y+++e+ g+l+
  Kaladp0059s0244.3.p 442 SLDATLARDSQDRINVERQCLARDIVNIVACEGEERIERYEVAGKWRARMMMAGFTSLPVSQSVQESIRNLIRKYCDR-YKMKEDLGALL 530
                          ****************************************************************************66.*********** PP

                 GRAS 360 lgWkdrpLvsvSaWr 374
                          +gW+d++L+++SaWr
  Kaladp0059s0244.3.p 531 FGWEDKNLIVASAWR 545
                          **************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 546 aa     Download sequence    
MSLVRRVEPS GTSRASRNIY SVADKQRLKQ TNRSSSSNSF ETNYLLDSPM EAQPAIVGAS  60
GNELQISSAS YPLKIAATSA ATQNNFASEY MENEISDSAE FDAETMRLKL QELEALLCDN  120
NFEGCDIDQD MELDGGWDNS ICNDLLQESP KESTSSSLSI ISSDKELSPA PFRTPKQLLI  180
HCASIIAEGK LREASAMINE LRQLVSIQGD PHERIAAYMV EGLAARMAES GQCLYKALKC  240
KEPPTTDRLA AMQILFEVCP CFKFGYMAAN GVIMEAIRDE KRVHIIDFDI NQGNQYITLI  300
QTLASRKGRR PHLRLTGVDD PESVQRSVGG LKIIGLRLEQ LAEALELPFE FHAVASATSD  360
VTPDMLDHRP DEVLIVNFAF QLHHMPDESV STVNQRDQLL RKIKGLHPKL VTVVEQDVNT  420
NTSPFFPRFI EAYNYYSAVF ESLDATLARD SQDRINVERQ CLARDIVNIV ACEGEERIER  480
YEVAGKWRAR MMMAGFTSLP VSQSVQESIR NLIRKYCDRY KMKEDLGALL FGWEDKNLIV  540
ASAWR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21450.10.0GRAS family protein