PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0059s0244.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | GRAS | ||||||||
Protein Properties | Length: 546aa MW: 61159.4 Da PI: 4.8989 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 446.2 | 2.1e-136 | 176 | 545 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPil 91 ++lL++cA +++g+l++a+a++++l++l+s +gdp +R+aay++e+Laar+a+s++ lykal+++e + ++++laa+++++ev+P++ Kaladp0059s0244.1.p 176 KQLLIHCASIIAEGKLREASAMINELRQLVSIQGDPHERIAAYMVEGLAARMAESGQCLYKALKCKEPP---TTDRLAAMQILFEVCPCF 262 589*****************************************************************9...9***************** PP GRAS 92 kfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefn 179 kf++++aN I+ea+ e+rvHiiDfdi+qG Q+++L+q+LasR++ p+lR+Tgv++pes+ s l+ +g rL+++Ae+l++pfef+ Kaladp0059s0244.1.p 263 KFGYMAANGVIMEAIRDEKRVHIIDFDINQGNQYITLIQTLASRKGRRPHLRLTGVDDPESVqrSVGGLKIIGLRLEQLAEALELPFEFH 352 ************************************************************9989999*********************** PP GRAS 180 vlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfd 269 + va++++d+++++L+ +p+E+l+Vn+++qlh+++desvs+ ++rd++L+ +k+l Pk+v+vveq++++n+++F+ rf+ea +yysa+f+ Kaladp0059s0244.1.p 353 A-VASATSDVTPDMLDHRPDEVLIVNFAFQLHHMPDESVSTVNQRDQLLRKIKGLHPKLVTVVEQDVNTNTSPFFPRFIEAYNYYSAVFE 441 *.7*************************************************************************************** PP GRAS 270 sleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslv 359 sl+a+l+r+s++ri+vEr++l+r+ivn+vaceg+er+er e ++kWr+r+++aGF+++p+s++++++++ l+rk+ ++ y+++e+ g+l+ Kaladp0059s0244.1.p 442 SLDATLARDSQDRINVERQCLARDIVNIVACEGEERIERYEVAGKWRARMMMAGFTSLPVSQSVQESIRNLIRKYCDR-YKMKEDLGALL 530 ****************************************************************************66.*********** PP GRAS 360 lgWkdrpLvsvSaWr 374 +gW+d++L+++SaWr Kaladp0059s0244.1.p 531 FGWEDKNLIVASAWR 545 **************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 546 aa Download sequence |
MSLVRRVEPS GTSRASRNIY SVADKQRLKQ TNRSSSSNSF ETNYLLDSPM EAQPAIVGAS 60 GNELQISSAS YPLKIAATSA ATQNNFASEY MENEISDSAE FDAETMRLKL QELEALLCDN 120 NFEGCDIDQD MELDGGWDNS ICNDLLQESP KESTSSSLSI ISSDKELSPA PFRTPKQLLI 180 HCASIIAEGK LREASAMINE LRQLVSIQGD PHERIAAYMV EGLAARMAES GQCLYKALKC 240 KEPPTTDRLA AMQILFEVCP CFKFGYMAAN GVIMEAIRDE KRVHIIDFDI NQGNQYITLI 300 QTLASRKGRR PHLRLTGVDD PESVQRSVGG LKIIGLRLEQ LAEALELPFE FHAVASATSD 360 VTPDMLDHRP DEVLIVNFAF QLHHMPDESV STVNQRDQLL RKIKGLHPKL VTVVEQDVNT 420 NTSPFFPRFI EAYNYYSAVF ESLDATLARD SQDRINVERQ CLARDIVNIV ACEGEERIER 480 YEVAGKWRAR MMMAGFTSLP VSQSVQESIR NLIRKYCDRY KMKEDLGALL FGWEDKNLIV 540 ASAWR* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G21450.1 | 0.0 | GRAS family protein |