PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0059s0221.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

Trihelix

Protein Properties

Length: 607aa MW: 67279 Da PI: 6.6886

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0059s0221.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	43.2	1e-13	87	135	37	87
trihelix 37 kmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 km e g++rs+k+Ckek+en+ k++k++keg++++ + +t+++fdqlea Kaladp0059s0221.2.p 87 KMGELGYHRSAKKCKEKFENVYKYHKRTKEGRSSK--SDGKTYRFFDQLEA 135 899****************************97..45567*****85 PP
2	trihelix	92.6	4e-29	409	493	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rW+k ev +L+++r++ e +++++ k+p Wee+s+ mr+ g++r++k+Ckekwen+nk++kk+ke++k+r +e+s+tcpy++ l+ Kaladp0059s0221.2.p 409 RWPKAEVETLVKLRTSFEIKYQENGPKGPFWEEISAGMRSLGYNRNAKRCKEKWENINKYFKKVKESNKQR-PEDSKTCPYYHLLD 493 8******************************************************************98.99*******987 PP

Sequence ? help Back to Top
Protein Sequence Length: 607 aa Download sequence
MMLGGGGGGD GASMLVSSAG GGGDNTASNN NNSSVGGVVV FGEDQEIHNS TSGNNNMMMM 60 MEDGDRNNSG GNRWPRQETL ALLKIRKMGE LGYHRSAKKC KEKFENVYKY HKRTKEGRSS 120 KSDGKTYRFF DQLEALDQLQ PFQMPPPPVQ QPPQVSHSKA PPFLMQPPPA LQTPTTISFS 180 QHQPCTNNVT NSNPITTTAP ITPVPTNPTI ISPNYQSGAT TFMVSTSSST SSDDLQQRRR 240 TGKKRKWRDF FEKLMRDVVD KQEELQNKFL RSIEMRERER SMREEAWRME EMARLNREHE 300 VLVQERAAAA AKDAAVIAFL QKIAGQQPQT QSQPQPQLQA LPPQPKQQPP QPPHTIQLNP 360 STTPPPPQRQ PPPQQPQPLN VMRPDSNAAG AKNNLAIVCG SNQPASSSRW PKAEVETLVK 420 LRTSFEIKYQ ENGPKGPFWE EISAGMRSLG YNRNAKRCKE KWENINKYFK KVKESNKQRP 480 EDSKTCPYYH LLDTIYKEKK GGGGGGGNIN SYLPPHSTNS LMAPPLMVQP EQQWPLAPQA 540 QARHQNEQGE DQDDMLDEDE LDEDMEDEEE EGDEEDNNGG TYEVVATASN GAPPAATGSL 600 GTTAVA*

Sequence ? help Back to Top

Protein Sequence Length: 607 aa Download sequence

MMLGGGGGGD GASMLVSSAG GGGDNTASNN NNSSVGGVVV FGEDQEIHNS TSGNNNMMMM  60
MEDGDRNNSG GNRWPRQETL ALLKIRKMGE LGYHRSAKKC KEKFENVYKY HKRTKEGRSS  120
KSDGKTYRFF DQLEALDQLQ PFQMPPPPVQ QPPQVSHSKA PPFLMQPPPA LQTPTTISFS  180
QHQPCTNNVT NSNPITTTAP ITPVPTNPTI ISPNYQSGAT TFMVSTSSST SSDDLQQRRR  240
TGKKRKWRDF FEKLMRDVVD KQEELQNKFL RSIEMRERER SMREEAWRME EMARLNREHE  300
VLVQERAAAA AKDAAVIAFL QKIAGQQPQT QSQPQPQLQA LPPQPKQQPP QPPHTIQLNP  360
STTPPPPQRQ PPPQQPQPLN VMRPDSNAAG AKNNLAIVCG SNQPASSSRW PKAEVETLVK  420
LRTSFEIKYQ ENGPKGPFWE EISAGMRSLG YNRNAKRCKE KWENINKYFK KVKESNKQRP  480
EDSKTCPYYH LLDTIYKEKK GGGGGGGNIN SYLPPHSTNS LMAPPLMVQP EQQWPLAPQA  540
QARHQNEQGE DQDDMLDEDE LDEDMEDEEE EGDEEDNNGG TYEVVATASN GAPPAATGSL  600
GTTAVA*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	237	246	QRRRTGKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76880.1	1e-52	Trihelix family protein