PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0059s0221.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

Trihelix

Protein Properties

Length: 629aa MW: 69784.7 Da PI: 6.3786

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0059s0221.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	96.8	2e-30	73	157	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+laL+++r++m+ ++r+++lk+plW++vs+km e g++rs+k+Ckek+en+ k++k++keg++++ + +t+++fdqlea Kaladp0059s0221.1.p 73 RWPRQETLALLKIRSDMDVAFRDSNLKGPLWDDVSRKMGELGYHRSAKKCKEKFENVYKYHKRTKEGRSSK--SDGKTYRFFDQLEA 157 8******************************************************************97..45567*****85 PP
2	trihelix	92.5	4.2e-29	431	515	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rW+k ev +L+++r++ e +++++ k+p Wee+s+ mr+ g++r++k+Ckekwen+nk++kk+ke++k+r +e+s+tcpy++ l+ Kaladp0059s0221.1.p 431 RWPKAEVETLVKLRTSFEIKYQENGPKGPFWEEISAGMRSLGYNRNAKRCKEKWENINKYFKKVKESNKQR-PEDSKTCPYYHLLD 515 8******************************************************************98.99*******987 PP

Sequence ? help Back to Top
Protein Sequence Length: 629 aa Download sequence
MMLGGGGGGD GASMLVSSAG GGGDNTASNN NNSSVGGVVV FGEDQEIHNS TSGNNNMMMM 60 MEDGDRNNSG GNRWPRQETL ALLKIRSDMD VAFRDSNLKG PLWDDVSRKM GELGYHRSAK 120 KCKEKFENVY KYHKRTKEGR SSKSDGKTYR FFDQLEALDQ LQPFQMPPPP VQQPPQVSHS 180 KAPPFLMQPP PALQTPTTIS FSQHQPCTNN VTNSNPITTT APITPVPTNP TIISPNYQSG 240 ATTFMVSTSS STSSDDLQQR RRTGKKRKWR DFFEKLMRDV VDKQEELQNK FLRSIEMRER 300 ERSMREEAWR MEEMARLNRE HEVLVQERAA AAAKDAAVIA FLQKIAGQQP QTQSQPQPQL 360 QALPPQPKQQ PPQPPHTIQL NPSTTPPPPQ RQPPPQQPQP LNVMRPDSNA AGAKNNLAIV 420 CGSNQPASSS RWPKAEVETL VKLRTSFEIK YQENGPKGPF WEEISAGMRS LGYNRNAKRC 480 KEKWENINKY FKKVKESNKQ RPEDSKTCPY YHLLDTIYKE KKGGGGGGGN INSYLPPHST 540 NSLMAPPLMV QPEQQWPLAP QAQARHQNEQ GEDQDDMLDE DELDEDMEDE EEEGDEEDNN 600 GGTYEVVATA SNGAPPAATG SLGTTAVA*

Sequence ? help Back to Top

Protein Sequence Length: 629 aa Download sequence

MMLGGGGGGD GASMLVSSAG GGGDNTASNN NNSSVGGVVV FGEDQEIHNS TSGNNNMMMM  60
MEDGDRNNSG GNRWPRQETL ALLKIRSDMD VAFRDSNLKG PLWDDVSRKM GELGYHRSAK  120
KCKEKFENVY KYHKRTKEGR SSKSDGKTYR FFDQLEALDQ LQPFQMPPPP VQQPPQVSHS  180
KAPPFLMQPP PALQTPTTIS FSQHQPCTNN VTNSNPITTT APITPVPTNP TIISPNYQSG  240
ATTFMVSTSS STSSDDLQQR RRTGKKRKWR DFFEKLMRDV VDKQEELQNK FLRSIEMRER  300
ERSMREEAWR MEEMARLNRE HEVLVQERAA AAAKDAAVIA FLQKIAGQQP QTQSQPQPQL  360
QALPPQPKQQ PPQPPHTIQL NPSTTPPPPQ RQPPPQQPQP LNVMRPDSNA AGAKNNLAIV  420
CGSNQPASSS RWPKAEVETL VKLRTSFEIK YQENGPKGPF WEEISAGMRS LGYNRNAKRC  480
KEKWENINKY FKKVKESNKQ RPEDSKTCPY YHLLDTIYKE KKGGGGGGGN INSYLPPHST  540
NSLMAPPLMV QPEQQWPLAP QAQARHQNEQ GEDQDDMLDE DELDEDMEDE EEEGDEEDNN  600
GGTYEVVATA SNGAPPAATG SLGTTAVA*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	259	268	QRRRTGKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76880.1	1e-52	Trihelix family protein