PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0059s0175.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

Trihelix

Protein Properties

Length: 534aa MW: 60277.3 Da PI: 7.0035

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0059s0175.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	86.4	3.3e-27	131	216	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW+++e++ L+++r++++++++++ k+plW+evs+ m +e+g++rs k+C+ek+enl k+ykk+ke ++++ + +++++f+qlea Kaladp0059s0175.2.p 131 RWPREETMSLLQIRSRLHSNFKQATHKGPLWDEVSRIMyEEHGYQRSGKKCREKFENLYKYYKKTKEAKSGK--HDGKNYRFFRQLEA 216 8***********************************99************************9995..67778*****85 PP

Sequence ? help Back to Top
Protein Sequence Length: 534 aa Download sequence
MEQVDEQQQQ AAAEVDVVNH HQNNSINNHY AGLIQTSKPL TTSMSYFQPP QPTNLDHPIY 60 SALSHRFFFN SNTHNNQNQQ QQRPYHEVDG IGTTSTYLAA SGGLLLESCS AASEATAAAF 120 NYGSGNSCSS RWPREETMSL LQIRSRLHSN FKQATHKGPL WDEVSRIMYE EHGYQRSGKK 180 CREKFENLYK YYKKTKEAKS GKHDGKNYRF FRQLEALYGD QNEVIGTSMT DHLAAAQPNT 240 ISSQAHFPPN PAADSDGINN NQIMMMGGSA HLFGDSDPQV ISPNNHHHNS MKLPCDQSCL 300 SLSNHNSSLF TSSSSEDNKR GHNKKYKLKV KIKEFIDTQM NSLMEQQQFC MEKVMETIEK 360 KETERALREE EWRQEAEERL EKEHKYWESE RAWMKARDAA LMETIQKLTA ARSAASSSSS 420 VRDVARVTSL ASHMQQIPFS SSSGNLINKQ PAEIVTVRNP QALYNYQESQ DGWFMAAANH 480 HHHHDSNNNN GFRFVMSDGN NGGSGGSVIW DGSSSFGLKL NNGDDDHHHR HQN*

Sequence ? help Back to Top

Protein Sequence Length: 534 aa Download sequence

MEQVDEQQQQ AAAEVDVVNH HQNNSINNHY AGLIQTSKPL TTSMSYFQPP QPTNLDHPIY  60
SALSHRFFFN SNTHNNQNQQ QQRPYHEVDG IGTTSTYLAA SGGLLLESCS AASEATAAAF  120
NYGSGNSCSS RWPREETMSL LQIRSRLHSN FKQATHKGPL WDEVSRIMYE EHGYQRSGKK  180
CREKFENLYK YYKKTKEAKS GKHDGKNYRF FRQLEALYGD QNEVIGTSMT DHLAAAQPNT  240
ISSQAHFPPN PAADSDGINN NQIMMMGGSA HLFGDSDPQV ISPNNHHHNS MKLPCDQSCL  300
SLSNHNSSLF TSSSSEDNKR GHNKKYKLKV KIKEFIDTQM NSLMEQQQFC MEKVMETIEK  360
KETERALREE EWRQEAEERL EKEHKYWESE RAWMKARDAA LMETIQKLTA ARSAASSSSS  420
VRDVARVTSL ASHMQQIPFS SSSGNLINKQ PAEIVTVRNP QALYNYQESQ DGWFMAAANH  480
HHHHDSNNNN GFRFVMSDGN NGGSGGSVIW DGSSSFGLKL NNGDDDHHHR HQN*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03680.1	2e-61	Trihelix family protein