PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0059s0175.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | Trihelix | ||||||||
Protein Properties | Length: 534aa MW: 60277.3 Da PI: 7.0035 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 86.4 | 3.3e-27 | 131 | 216 | 1 | 87 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW+++e++ L+++r++++++++++ k+plW+evs+ m +e+g++rs k+C+ek+enl k+ykk+ke ++++ + +++++f+qlea Kaladp0059s0175.1.p 131 RWPREETMSLLQIRSRLHSNFKQATHKGPLWDEVSRIMyEEHGYQRSGKKCREKFENLYKYYKKTKEAKSGK--HDGKNYRFFRQLEA 216 8*************************************99****************************9995..67778*******85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 534 aa Download sequence |
MEQVDEQQQQ AAAEVDVVNH HQNNSINNHY AGLIQTSKPL TTSMSYFQPP QPTNLDHPIY 60 SALSHRFFFN SNTHNNQNQQ QQRPYHEVDG IGTTSTYLAA SGGLLLESCS AASEATAAAF 120 NYGSGNSCSS RWPREETMSL LQIRSRLHSN FKQATHKGPL WDEVSRIMYE EHGYQRSGKK 180 CREKFENLYK YYKKTKEAKS GKHDGKNYRF FRQLEALYGD QNEVIGTSMT DHLAAAQPNT 240 ISSQAHFPPN PAADSDGINN NQIMMMGGSA HLFGDSDPQV ISPNNHHHNS MKLPCDQSCL 300 SLSNHNSSLF TSSSSEDNKR GHNKKYKLKV KIKEFIDTQM NSLMEQQQFC MEKVMETIEK 360 KETERALREE EWRQEAEERL EKEHKYWESE RAWMKARDAA LMETIQKLTA ARSAASSSSS 420 VRDVARVTSL ASHMQQIPFS SSSGNLINKQ PAEIVTVRNP QALYNYQESQ DGWFMAAANH 480 HHHHDSNNNN GFRFVMSDGN NGGSGGSVIW DGSSSFGLKL NNGDDDHHHR HQN* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G03680.1 | 2e-61 | Trihelix family protein |