PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0059s0110.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

Trihelix

Protein Properties

Length: 557aa MW: 60585 Da PI: 7.3423

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0059s0110.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	54	4.4e-17	176	262	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergf..erspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++ + +L+ea+ ++ +l++g+l++ +Weev+ +re+ +s +qCk+k +nl+kryk ++++++++ s+s++p+f+++e Kaladp0059s0110.2.p 176 EWSDTAIGCLLEAYMSKYAQLNKGNLRGRDWEEVAGMVREGCQkqAKSVEQCKNKVDNLKKRYKLERHRMSSG-GVSTSHWPWFQKME 262 5********************************998765442256999******************9.667779*****8 PP

Sequence ? help Back to Top
Protein Sequence Length: 557 aa Download sequence
MLNQTPSSFL FLHLTPSSSP NETLTVTSPT PLSMASCDDD FPLLPDDRHH HHHQQQQSHP 60 QFQHQGFYRL NRFINKVATA PTARSPIRGG RDEGSERFAD LSFTAKCASA FPDVAPFSGD 120 EEAGEEEEAA NQSSGRKERE EVIDGTALYK RSKIGEGSGS GSAAPGGGDY RRDREEWSDT 180 AIGCLLEAYM SKYAQLNKGN LRGRDWEEVA GMVREGCQKQ AKSVEQCKNK VDNLKKRYKL 240 ERHRMSSGGV STSHWPWFQK MEEIFGDLVP RNTADLEEDK AVQSSSRQAK RYSVATANPV 300 SPLLNVRMKQ APRLRWRRVV FKISGVALAG TGSGSNNFDP EVARLIASEV AKASRAGVEV 360 AIVVGGRNLF CGDTWVTATG SDRSTAYQIG MMATVMNSIL LQSAMEKMGI QARVQSGLIV 420 QESAEPYNRQ RAIRHLEKGR IVIFGGVGVG IGNPLFSTDT AAALRASEIH AEAVLKGANA 480 DGLYGCNSGN NNIFEHISFR ALGSGGANFM DMMALSYCEE NSIPVVVFNL LEPGNISKAI 540 CGEQVGTLID QTGRIS*

Sequence ? help Back to Top

Protein Sequence Length: 557 aa Download sequence

MLNQTPSSFL FLHLTPSSSP NETLTVTSPT PLSMASCDDD FPLLPDDRHH HHHQQQQSHP  60
QFQHQGFYRL NRFINKVATA PTARSPIRGG RDEGSERFAD LSFTAKCASA FPDVAPFSGD  120
EEAGEEEEAA NQSSGRKERE EVIDGTALYK RSKIGEGSGS GSAAPGGGDY RRDREEWSDT  180
AIGCLLEAYM SKYAQLNKGN LRGRDWEEVA GMVREGCQKQ AKSVEQCKNK VDNLKKRYKL  240
ERHRMSSGGV STSHWPWFQK MEEIFGDLVP RNTADLEEDK AVQSSSRQAK RYSVATANPV  300
SPLLNVRMKQ APRLRWRRVV FKISGVALAG TGSGSNNFDP EVARLIASEV AKASRAGVEV  360
AIVVGGRNLF CGDTWVTATG SDRSTAYQIG MMATVMNSIL LQSAMEKMGI QARVQSGLIV  420
QESAEPYNRQ RAIRHLEKGR IVIFGGVGVG IGNPLFSTDT AAALRASEIH AEAVLKGANA  480
DGLYGCNSGN NNIFEHISFR ALGSGGANFM DMMALSYCEE NSIPVVVFNL LEPGNISKAI  540
CGEQVGTLID QTGRIS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10030.1	1e-172	Trihelix family protein