PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0059s0110.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

Trihelix

Protein Properties

Length: 564aa MW: 61316.8 Da PI: 6.9815

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0059s0110.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	54	4.4e-17	183	269	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergf..erspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++ + +L+ea+ ++ +l++g+l++ +Weev+ +re+ +s +qCk+k +nl+kryk ++++++++ s+s++p+f+++e Kaladp0059s0110.1.p 183 EWSDTAIGCLLEAYMSKYAQLNKGNLRGRDWEEVAGMVREGCQkqAKSVEQCKNKVDNLKKRYKLERHRMSSG-GVSTSHWPWFQKME 269 5********************************998765442256999******************9.667779*****8 PP

Sequence ? help Back to Top
Protein Sequence Length: 564 aa Download sequence
MLNQTPSSFL FLHLTPSSSP NETLTVTSPT PLSMASCDDD FPLLPDDRHH HHHQQQQSHP 60 QFQHQGFYRL NRFINKVATA PTARSPIRGG RDEGSERFAD LSFTAKCASA FPDVAPFSGD 120 EEASPFAEEA GEEEEAANQS SGRKEREEVI DGTALYKRSK IGEGSGSGSA APGGGDYRRD 180 REEWSDTAIG CLLEAYMSKY AQLNKGNLRG RDWEEVAGMV REGCQKQAKS VEQCKNKVDN 240 LKKRYKLERH RMSSGGVSTS HWPWFQKMEE IFGDLVPRNT ADLEEDKAVQ SSSRQAKRYS 300 VATANPVSPL LNVRMKQAPR LRWRRVVFKI SGVALAGTGS GSNNFDPEVA RLIASEVAKA 360 SRAGVEVAIV VGGRNLFCGD TWVTATGSDR STAYQIGMMA TVMNSILLQS AMEKMGIQAR 420 VQSGLIVQES AEPYNRQRAI RHLEKGRIVI FGGVGVGIGN PLFSTDTAAA LRASEIHAEA 480 VLKGANADGL YGCNSGNNNI FEHISFRALG SGGANFMDMM ALSYCEENSI PVVVFNLLEP 540 GNISKAICGE QVGTLIDQTG RIS*

Sequence ? help Back to Top

Protein Sequence Length: 564 aa Download sequence

MLNQTPSSFL FLHLTPSSSP NETLTVTSPT PLSMASCDDD FPLLPDDRHH HHHQQQQSHP  60
QFQHQGFYRL NRFINKVATA PTARSPIRGG RDEGSERFAD LSFTAKCASA FPDVAPFSGD  120
EEASPFAEEA GEEEEAANQS SGRKEREEVI DGTALYKRSK IGEGSGSGSA APGGGDYRRD  180
REEWSDTAIG CLLEAYMSKY AQLNKGNLRG RDWEEVAGMV REGCQKQAKS VEQCKNKVDN  240
LKKRYKLERH RMSSGGVSTS HWPWFQKMEE IFGDLVPRNT ADLEEDKAVQ SSSRQAKRYS  300
VATANPVSPL LNVRMKQAPR LRWRRVVFKI SGVALAGTGS GSNNFDPEVA RLIASEVAKA  360
SRAGVEVAIV VGGRNLFCGD TWVTATGSDR STAYQIGMMA TVMNSILLQS AMEKMGIQAR  420
VQSGLIVQES AEPYNRQRAI RHLEKGRIVI FGGVGVGIGN PLFSTDTAAA LRASEIHAEA  480
VLKGANADGL YGCNSGNNNI FEHISFRALG SGGANFMDMM ALSYCEENSI PVVVFNLLEP  540
GNISKAICGE QVGTLIDQTG RIS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10030.1	1e-173	Trihelix family protein