PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Kaladp0059s0055.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 270aa MW: 30813.7 Da PI: 9.5661 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 31.3 | 4.7e-10 | 21 | 66 | 3 | 46 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46 WT eE +l+ a + + ++ +W+++a++++ g++ k+++s + Kaladp0059s0055.1.p 21 YWTREENKLFESALAIYDKNtpdRWEKVAQMIP-GKSVKDVISQYKE 66 6********************************.*********9975 PP | |||||||
2 | Myb_DNA-binding | 42.2 | 1.9e-13 | 119 | 164 | 2 | 47 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++WT++E+ +++ + ++G+g+W++I+r + +t+ q+ s+ qky Kaladp0059s0055.1.p 119 LPWTEDEHRRFLMGLLKHGKGDWRSISRNFVASKTPTQVASHAQKY 164 69*****************************99************9 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 270 aa Download sequence |
MYQTFQLQNS NWLPQKSHSS YWTREENKLF ESALAIYDKN TPDRWEKVAQ MIPGKSVKDV 60 ISQYKELEDD VINIEAGLVP TPGYLTSSFT LELGDDRDFD VLRKKSRARS ADREKKKGLP 120 WTEDEHRRFL MGLLKHGKGD WRSISRNFVA SKTPTQVASH AQKYFLRLNS GLKDKRRPSI 180 HDITTTNLSN APPSHDSGLA AFDQFVVLPP REKEQNVALD WNQHGNLSVM GFEPNLPPAP 240 YESLYGYGIH VGSHNPMFEV QSARQRIRG* |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 103 | 117 | RKKSRARSADREKKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G38090.1 | 7e-83 | MYB family protein |