PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0058s0582.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MYB | ||||||||
Protein Properties | Length: 368aa MW: 41083.6 Da PI: 6.7835 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54.9 | 2.1e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +lv +++++G+g+W++++ g+ R+ k+c++rw +yl Kaladp0058s0582.1.p 14 KGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNYL 61 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 48.7 | 1.7e-15 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++++E++ ++++ ++lG++ W++Ia++++ Rt++++k++w+++l Kaladp0058s0582.1.p 67 RGNFSEQEEKMIIHLQALLGNR-WAAIASYLP-QRTDNDIKNYWNTHL 112 89********************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 368 aa Download sequence |
MGRPPCCDKV GVKKGPWTPE EDIILVSYIQ EHGPGNWRAV PTNTGLLRCS KSCRLRWTNY 60 LRPGIRRGNF SEQEEKMIIH LQALLGNRWA AIASYLPQRT DNDIKNYWNT HLKKKLRKIQ 120 SGGGDEIVGG QKSQPNQETS FCKGQWERRL QTDIHTAKQA LCEALSVDNN LGNNPTRLVA 180 QSDSSNPFCP NSFSPPATLL TQTTATSSSS SSGVYASSTE NISKLLQNWM KKTPSSAAKS 240 ELSDHNDRFR FSITNKLQLP KQEFGPTRSS SSSDGSLSAT TTGAFDSIFR MHNSDDENNA 300 NFGQDHQSTS LFHDADYKPD MEHGQFQLQQ QDEMPLTLLE KWLFDDVNAP SQGLMDISPL 360 EESSEFF* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G47600.1 | 8e-99 | MYB family protein |