PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0058s0550.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | FAR1 | ||||||||
Protein Properties | Length: 108aa MW: 12179.7 Da PI: 8.3188 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 48.1 | 3.8e-15 | 36 | 105 | 2 | 72 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek 72 Yn+YA + GF +rk+ s +s+ ng+i+++++vC+keg+++ + ++++ + r+gC a++++ +++ Kaladp0058s0550.2.p 36 AYNHYAARRGFGIRKHFSARSRYNGHIIRKEYVCNKEGFKNVVPQI-IDHKKCQRDARIGCLANIEIGQKS 105 5****************************************99998.888999999**********98875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 108 aa Download sequence |
MDLENTDNTG VGDASCETVT GSLGKYFDTM EEVYDAYNHY AARRGFGIRK HFSARSRYNG 60 HIIRKEYVCN KEGFKNVVPQ IIDHKKCQRD ARIGCLANIE IGQKSEK* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G18960.1 | 9e-12 | FAR1 family protein |