PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0058s0549.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

Trihelix

Protein Properties

Length: 689aa MW: 74545.3 Da PI: 9.5461

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0058s0549.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	93.8	1.6e-29	71	155	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+ aL+++r+em++++r++ lk+plWeevs+k+ e g+ rs k+Ckek+en++k+yk++keg+ +r ++ +t+++f++lea Kaladp0058s0549.1.p 71 RWPRQETVALLKIRSEMDSAFRDATLKGPLWEEVSRKLGELGYVRSGKKCKEKFENVHKYYKRTKEGRAGR--QDGKTYRFFTHLEA 155 8******************************************************************98..56667****985 PP
2	trihelix	107.1	1.2e-33	504	589	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW+k evlaLi++r+++e+r++++ k+plWee+s+ mr+ g++rs+k+Ckekwen+nk++kk+ke++kkr +e+ +tcpyf++l+a Kaladp0058s0549.1.p 504 RWPKVEVLALIKLRSNLENRYQEAGPKGPLWEEISAGMRQMGYSRSSKRCKEKWENINKYFKKVKESNKKR-PEDAKTCPYFNELDA 589 8*******************************************************************8.99999*****985 PP

Sequence ? help Back to Top
Protein Sequence Length: 689 aa Download sequence
MQQQQQGSQY GGVSPDLGSA PRTQMLAAGG GGSEQAEAAS PISSRPPASI MNFDDLVDDT 60 DRAGSTSSGN RWPRQETVAL LKIRSEMDSA FRDATLKGPL WEEVSRKLGE LGYVRSGKKC 120 KEKFENVHKY YKRTKEGRAG RQDGKTYRFF THLEALQAVT ASGSGSGSTN LIPSAATPPP 180 PPLLMTSSGP PAAAASPLRN MQFATPVSVG IGGNIVMQMA GVAPPSQPFT MYSRDLSMGA 240 GVSVPGSMSA AAPVGISFSS GSSSSGSYDS DEDEEEVDDV SEEERPSSTP VGSGQKRKRG 300 YSFSSRGGGG TKRRMMDFFE GLMKQVMQKQ EAMQQRFLEA IAKREQDRMM REEAWKRQEA 360 ARLSREQELM VQERATAASR DAAIVSFLQK ITGQTIRLPQ PVSHQNVAVT PAAPPPSVPT 420 MPPAAPASIP SSTSPPSRQQ FQQKQHKSQQ QKQQPQNTDL VRQHQMPPPP STEAIMAVPE 480 RQIPPQDPPC GEGGGSYSEA ASSRWPKVEV LALIKLRSNL ENRYQEAGPK GPLWEEISAG 540 MRQMGYSRSS KRCKEKWENI NKYFKKVKES NKKRPEDAKT CPYFNELDAL YQKKILSGAY 600 SGSSSIIVPF QQQQQPQQGL SVDQSKNQET SISNVGVVQT SAAAQVESAD KRDGTDLEQP 660 NNGGLPDSIF EDQGGNAGAT GGSRKRTS*

Sequence ? help Back to Top

Protein Sequence Length: 689 aa Download sequence

MQQQQQGSQY GGVSPDLGSA PRTQMLAAGG GGSEQAEAAS PISSRPPASI MNFDDLVDDT  60
DRAGSTSSGN RWPRQETVAL LKIRSEMDSA FRDATLKGPL WEEVSRKLGE LGYVRSGKKC  120
KEKFENVHKY YKRTKEGRAG RQDGKTYRFF THLEALQAVT ASGSGSGSTN LIPSAATPPP  180
PPLLMTSSGP PAAAASPLRN MQFATPVSVG IGGNIVMQMA GVAPPSQPFT MYSRDLSMGA  240
GVSVPGSMSA AAPVGISFSS GSSSSGSYDS DEDEEEVDDV SEEERPSSTP VGSGQKRKRG  300
YSFSSRGGGG TKRRMMDFFE GLMKQVMQKQ EAMQQRFLEA IAKREQDRMM REEAWKRQEA  360
ARLSREQELM VQERATAASR DAAIVSFLQK ITGQTIRLPQ PVSHQNVAVT PAAPPPSVPT  420
MPPAAPASIP SSTSPPSRQQ FQQKQHKSQQ QKQQPQNTDL VRQHQMPPPP STEAIMAVPE  480
RQIPPQDPPC GEGGGSYSEA ASSRWPKVEV LALIKLRSNL ENRYQEAGPK GPLWEEISAG  540
MRQMGYSRSS KRCKEKWENI NKYFKKVKES NKKRPEDAKT CPYFNELDAL YQKKILSGAY  600
SGSSSIIVPF QQQQQPQQGL SVDQSKNQET SISNVGVVQT SAAAQVESAD KRDGTDLEQP  660
NNGGLPDSIF EDQGGNAGAT GGSRKRTS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76880.1	7e-47	Trihelix family protein