PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0058s0314.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

Trihelix

Protein Properties

Length: 361aa MW: 40896.2 Da PI: 7.6245

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0058s0314.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	74.4	1.9e-23	52	131	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 W+++e++ Li +rre++ +++ k++ +lWe++s+kmr++gf rsp++C++kw+nl k++k+++ +++++ +++++++le Kaladp0058s0314.1.p 52 WSQDEIRSLIILRREVDGLFNTCKSNRHLWEQISAKMRRKGFDRSPTMCTDKWRNLLKEFKRVRVQDGGN-----GKMSWYKELE 131 ****************************************************************999984.....2457788886 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MYVSEKNRST DAYKVGRVMM VEPISVSPRV MTGESSGEDH EVKAPKKRAE TWSQDEIRSL 60 IILRREVDGL FNTCKSNRHL WEQISAKMRR KGFDRSPTMC TDKWRNLLKE FKRVRVQDGG 120 NGKMSWYKEL EELLRNRSRH AAPPPASVVD SFMHLDDKVV QNAVGAYGPA EDSRPAVNLE 180 TQLDHDGDAL AIAIAPTDPV IADGVPPWSW RETPGTGEQP LPYGGRVISV KWGDYTRRIG 240 IDGSTEAIKE AIKSAFRLRT KRAFWLEDEH QIIRTLDRNM PLGNYTLYLD EGMTVKICLY 300 GGADRIIIRT EEKTFYTDEH FREYLARRGL SGLSELNNGF RSIDTLDDLR PGGAYQGVSE 360 *

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MYVSEKNRST DAYKVGRVMM VEPISVSPRV MTGESSGEDH EVKAPKKRAE TWSQDEIRSL  60
IILRREVDGL FNTCKSNRHL WEQISAKMRR KGFDRSPTMC TDKWRNLLKE FKRVRVQDGG  120
NGKMSWYKEL EELLRNRSRH AAPPPASVVD SFMHLDDKVV QNAVGAYGPA EDSRPAVNLE  180
TQLDHDGDAL AIAIAPTDPV IADGVPPWSW RETPGTGEQP LPYGGRVISV KWGDYTRRIG  240
IDGSTEAIKE AIKSAFRLRT KRAFWLEDEH QIIRTLDRNM PLGNYTLYLD EGMTVKICLY  300
GGADRIIIRT EEKTFYTDEH FREYLARRGL SGLSELNNGF RSIDTLDDLR PGGAYQGVSE  360
*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13450.1	1e-152	Trihelix family protein