PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0058s0031.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family C2H2
Protein Properties Length: 281aa    MW: 31109 Da    PI: 6.8852
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0058s0031.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.40.00023101123123
                          EEETTTTEEESSHHHHHHHHHHT CS
              zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                          ++C++C + F ++  L  H++ H
  Kaladp0058s0031.1.p 101 FSCNYCQRKFYSSQALGGHQNAH 123
                          89*****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MYSLMEEPSP SETSSIISTT DGITPPQVLL QKTPYPGLIV CVEDYDNEDH RERKSAIQLD  60
LYNSGNTSNQ ELNLIDNLDM ESMHTSSMTP QPPDGAEPRV FSCNYCQRKF YSSQALGGHQ  120
NAHKRERTIA KRGQRLGASM MAAATAFGHA YLQPHHHLPS MSALPIHGAY NRSLGIQVHS  180
MIQKPAYSQN TMLSGHPYGH RNWTRQPIEQ QPAVGKLSME IINQTSGVTG SISKFHTPKF  240
ETVNTDLPTD HIISGCWWPG GGISKPDQED LQKLDLSLKL *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10970.12e-52C2H2 family protein