PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0057s0098.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB
Protein Properties Length: 404aa    MW: 44803.4 Da    PI: 7.4147
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0057s0098.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.72.3e-171461148
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                         +g W++eEde+l++ ++++G g+W+++++  g+ R++k+c++rw +yl
  Kaladp0057s0098.1.p 14 KGLWSPEEDEKLLRHITKYGHGCWSSVPKLAGLQRCGKSCRLRWINYL 61
                         678*******************************************97 PP
2Myb_DNA-binding45.51.8e-1467110146
                          TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
      Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                          rg+++++E+ l++d+++ lG++ W+ Ia+ ++ gRt++++k+ w++
  Kaladp0057s0098.1.p  67 RGAFSPQEETLIIDLHAVLGNR-WSQIAAQLP-GRTDNEIKNLWNS 110
                          89********************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 404 aa     Download sequence    
MGRHSCCYKQ KLRKGLWSPE EDEKLLRHIT KYGHGCWSSV PKLAGLQRCG KSCRLRWINY  60
LRPDLKRGAF SPQEETLIID LHAVLGNRWS QIAAQLPGRT DNEIKNLWNS CLKKKLRQRG  120
IDPDTHKPLS SDPVKASLDT HPTGKQQQNS LFDAENKQQS NTREFFLDRF VVSANTETAS  180
STVTVAAASA GCKPAADVLG YFSFQQLSNN HSYHGSSAEH DSSNTLCFNP NDHQFSSNPV  240
PSMFSSISSS FLTAPTATAT LPCSNSNSNN SSSIGSYSMN HNASVQNWDS HSFSWGPSDC  300
GKSNKDDQQQ QQLDGGENED CKWSEYLQTT APFLLAGTSY PNLHAMCHST DIIKPETHCH  360
ESNNSTTASP ASLLWHHQQQ QSLSDAYSKQ DFHRLAVAFE PSF*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1112118LKKKLRQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01680.33e-88MYB family protein