PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0057s0080.3.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | C3H | ||||||||
Protein Properties | Length: 105aa MW: 11801.4 Da PI: 7.984 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 34 | 4.9e-11 | 57 | 79 | 5 | 27 |
--SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 5 lCrffartGtCkyGdrCkFaHgp 27 C++f +tG+C yGd+Ck+ H++ Kaladp0057s0080.3.p 57 VCNRFVKTGFCAYGDSCKYLHPK 79 5********************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 105 aa Download sequence |
MPLGKYYCDY CDKEFQDTPY ARKRHLQGLQ HQRARSIWYN SFKDPSQLCA EGFGAGVCNR 60 FVKTGFCAYG DSCKYLHPKT DNFPGQVPHA LDVGFAVCEF CGLS* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G26749.1 | 3e-28 | C3H family protein |