PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0057s0080.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | C3H | ||||||||
Protein Properties | Length: 147aa MW: 15905 Da PI: 8.1121 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 33.3 | 8.4e-11 | 57 | 79 | 5 | 27 |
--SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 5 lCrffartGtCkyGdrCkFaHgp 27 C++f +tG+C yGd+Ck+ H++ Kaladp0057s0080.1.p 57 VCNRFVKTGFCAYGDSCKYLHPK 79 5********************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 147 aa Download sequence |
MPLGKYYCDY CDKEFQDTPY ARKRHLQGLQ HQRARSIWYN SFKDPSQLCA EGFGAGVCNR 60 FVKTGFCAYG DSCKYLHPKT DNFPGQVPHV IGAMPPPGAG SQVYGGGSFP GTAVGSSLGI 120 SWDNLPPSLK PPPEGGYPPL PFVDWG* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G26749.1 | 5e-28 | C3H family protein |