PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0056s0096.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family C2H2
Protein Properties Length: 277aa    MW: 29297.9 Da    PI: 8.5743
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0056s0096.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.50.00091106126121
                          EEETTTTEEESSHHHHHHHHH CS
              zf-C2H2   1 ykCpdCgksFsrksnLkrHir 21 
                          y+C+ C+k+F++   L  H  
  Kaladp0056s0096.1.p 106 YECKTCSKTFPSFQALGGHRA 126
                          99*********9888877765 PP
2zf-C2H213.50.00022180202123
                          EEETTTTEEESSHHHHHHHHHHT CS
              zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                          ++C+ Cg  Fs+   L  H+r+H
  Kaladp0056s0096.1.p 180 HRCSVCGSEFSSGQALGGHMRRH 202
                          79********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MKQSKLLSKN RASLQTRNTL IIAMELPVDE VAAASLVPGA LQNISKGKRN KRSSGIASDE  60
EEDRRSYDSV VTEEEQDLAN CLILLARAEV VVGAKRRIAD VMGGCYECKT CSKTFPSFQA  120
LGGHRAGHGK PKSHIDDCDF APSSSSNCSV SPQPPTPPTT AANRNDVVVA KSSTRPSKAH  180
RCSVCGSEFS SGQALGGHMR RHRAVPVPSR SPSAGPSSMG SGGASSLEAK TRSFLSLDLN  240
LPAPEVGEIS QCQQNAAFHQ LETHAFSTHA LLGCHY*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28200.11e-30C2H2 family protein