PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0056s0068.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | Trihelix | ||||||||
Protein Properties | Length: 272aa MW: 30299.2 Da PI: 6.5505 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 32.7 | 2e-10 | 22 | 91 | 2 | 71 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr 71 Wt l+L++ +e + ++ + ++W+ +s+++++ ++r+ qC+ kw++l +y +ik++e+++ Kaladp0056s0068.1.p 22 WTLTDSLTLVNEIAAVEAECLDALSYYQKWKIISDNCAALEVNRTLDQCRRKWDSLFAEYDRIKRWEGGG 91 788888888888888888888888999****************************************976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 272 aa Download sequence |
MPPKKKEESA SRRTRSQVAP GWTLTDSLTL VNEIAAVEAE CLDALSYYQK WKIISDNCAA 60 LEVNRTLDQC RRKWDSLFAE YDRIKRWEGG GDAYWGLARE RRRAVGLPED FDRDLFNAVD 120 VVVKAQVERA SSRPDAVLED ADADPLGVIS PPVFKKQSHQ LTPQKRQVEV KKEKKIADDR 180 QTGSADVMAT QPGEKDGSVE VTASQLREKA ELIQAILEGK LAENKDYTLG DLKQGPSSRI 240 NLARRQGDKL IDCFGLIAST LDQLCKATHT Q* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G31270.1 | 7e-56 | Trihelix family protein |