PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0055s0403.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MIKC_MADS

Protein Properties

Length: 269aa MW: 30979 Da PI: 7.4783

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0055s0403.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	83.7	1.1e-26	10	59	2	51
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rienk+ rqvtfskRr+g++KK +ELSvLCda++ +iifsstgk +ey++ Kaladp0055s0403.1.p 10 RIENKTTRQVTFSKRRKGLMKKTHELSVLCDAQIGLIIFSSTGKKFEYCT 59 8***********************************************96 PP
2	K-box	67.5	4.5e-23	80	169	9	98
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 e+ + + ++e +++k+e++ L++++R + Ge+L+ Ls+++L+qLeq+Le s++kiR++Kn+l+ +q+++l +k + l++en +Lr + Kaladp0055s0403.1.p 80 PEHDNRDEICKEWRRIKAETSALEQNLRLYNGEGLGFLSHQNLEQLEQHLEYSVNKIRARKNQLFEQQMDNLERKVQLLDQENSKLRDFI 169 566778899*****************************************************************************9755 PP

Sequence ? help Back to Top
Protein Sequence Length: 269 aa Download sequence
MGRGKVEIRR IENKTTRQVT FSKRRKGLMK KTHELSVLCD AQIGLIIFSS TGKKFEYCTD 60 PLSMGHIIDE YLKCTGKRIP EHDNRDEICK EWRRIKAETS ALEQNLRLYN GEGLGFLSHQ 120 NLEQLEQHLE YSVNKIRARK NQLFEQQMDN LERKVQLLDQ ENSKLRDFIR EHETMGYQFH 180 DHQQVPGLEW KAPAAQAHLQ IQDNVRSSEL IDHRHQLMPF PAGNPELGGS GADNDHSTAL 240 QLAHLNNSYH PQVHSEPVSA LSDRLLTL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G23260.2	4e-54	MIKC_MADS family protein