PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0055s0363.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MYB | ||||||||
Protein Properties | Length: 283aa MW: 31903.7 Da PI: 7.4696 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 38.9 | 2e-12 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W+++Ed +l d++ +W++I+++ g+ R +k+c++rw +yl Kaladp0055s0363.1.p 14 RGLWSPDEDRKLRDYIINNDRASWSSIPAKAGLQRNGKSCRLRWINYL 61 788*****************99************************97 PP | |||||||
2 | Myb_DNA-binding | 48.2 | 2.5e-15 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg +T eE e + ++++lG++ W+ I+++++ gRt++++k++w++ Kaladp0055s0363.1.p 67 RGTFTLEERETVLTLHRMLGNK-WAEISKHLP-GRTDNEIKNYWHSN 111 899*******************.*********.***********975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 283 aa Download sequence |
MGHKPNTLKV KHRRGLWSPD EDRKLRDYII NNDRASWSSI PAKAGLQRNG KSCRLRWINY 60 LRPGLKRGTF TLEERETVLT LHRMLGNKWA EISKHLPGRT DNEIKNYWHS NLKSRNSVKN 120 EVSQSPSAAR QISSSMSSIC LQSLKTANNG SSLMGTSSVG TTACQPDTPA TKFASETLTP 180 KLLFAEWFSP DRRQQEFPDF LGGYGEHPND CLNPITSFPD YLLEELSFEE GSFCSNFNAP 240 DGLNFPSPYE LQGLISGEEE FDSTQKIDYI NFSDIHECKS CL* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25560.1 | 6e-51 | MYB family protein |