PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0054s0045.3.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 533aa MW: 58838.7 Da PI: 9.19

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0054s0045.3.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.7	8.6e-16	59	105	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+ Ede l +av+ + g++Wk+Ia+ ++ R++ qc +rwqk+l Kaladp0054s0045.3.p 59 KGGWTQHEDETLRNAVAAFKGKSWKKIAEFFP-DRSEVQCLHRWQKVL 105 688***************************.**********986 PP
2	Myb_DNA-binding	58.9	1.1e-18	111	157	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd+++ ++v+++G+ W+ Ia+ ++ gR +kqc++rw+++l Kaladp0054s0045.3.p 111 KGPWTQEEDDKITELVARYGPTKWSVIAKSLP-GRIGKQCRERWHNHL 157 79****************************.***********97 PP
3	Myb_DNA-binding	55.3	1.5e-17	163	206	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +++WT eE++ l +a++++G++ W+ Ia+ ++ gRt++++k++w++ Kaladp0054s0045.3.p 163 KDAWTLEEELALMNAHRLYGNK-WAEIAKVLP-GRTDNSIKNHWNS 206 679*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 533 aa Download sequence
MGELKIEEIC LENKQSLAAS SSSFSEGSGS ITIRSPGVSS PATTSPSQRR TTGPIRRAKG 60 GWTQHEDETL RNAVAAFKGK SWKKIAEFFP DRSEVQCLHR WQKVLNPELI KGPWTQEEDD 120 KITELVARYG PTKWSVIAKS LPGRIGKQCR ERWHNHLNPY IKKDAWTLEE ELALMNAHRL 180 YGNKWAEIAK VLPGRTDNSI KNHWNSSLKK KLDFYLATGN LPPISKNGAP NGVKDFNKST 240 ASRKAPACSK RESDSTAQSS SGTTEICNME DAKGQFESSA SHQDVHKPVL RSQVLPGHKV 300 IGCKDPPPKV EYRYTNIESM PEIENSRPGS YTVTNSVVRD SPQFETLTYG SLYYEPPSVE 360 SSIPSDTDLP DGQYKFHEVF SSATFSTPPS SKSRASLSPE SILKNAAKTF QNTPSIIRKR 420 RIDAETPPST NKSSKAEGGT IHDGHITYSE TEGPGYEPRE EQFCHSHADV GKEKTGACNG 480 TAYNVSPPYR LRTKRSSVIK SVEKQLAFTF DDLAIKGKST AAKDNPDANN AC*

Sequence ? help Back to Top

Protein Sequence Length: 533 aa Download sequence

MGELKIEEIC LENKQSLAAS SSSFSEGSGS ITIRSPGVSS PATTSPSQRR TTGPIRRAKG  60
GWTQHEDETL RNAVAAFKGK SWKKIAEFFP DRSEVQCLHR WQKVLNPELI KGPWTQEEDD  120
KITELVARYG PTKWSVIAKS LPGRIGKQCR ERWHNHLNPY IKKDAWTLEE ELALMNAHRL  180
YGNKWAEIAK VLPGRTDNSI KNHWNSSLKK KLDFYLATGN LPPISKNGAP NGVKDFNKST  240
ASRKAPACSK RESDSTAQSS SGTTEICNME DAKGQFESSA SHQDVHKPVL RSQVLPGHKV  300
IGCKDPPPKV EYRYTNIESM PEIENSRPGS YTVTNSVVRD SPQFETLTYG SLYYEPPSVE  360
SSIPSDTDLP DGQYKFHEVF SSATFSTPPS SKSRASLSPE SILKNAAKTF QNTPSIIRKR  420
RIDAETPPST NKSSKAEGGT IHDGHITYSE TEGPGYEPRE EQFCHSHADV GKEKTGACNG  480
TAYNVSPPYR LRTKRSSVIK SVEKQLAFTF DDLAIKGKST AAKDNPDANN AC*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02320.2	1e-148	MYB family protein