PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0053s0590.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 351aa MW: 39178.4 Da PI: 7.0005

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0053s0590.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.7	1.3e-18	15	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEde+lvd +++ G g+W++ ++ g++R++k+c++rw +yl Kaladp0053s0590.1.p 15 KGPWTPEEDEKLVDFINKNGHGSWRSLPKLAGLNRCGKSCRLRWTNYL 62 79********************************************97 PP
2	Myb_DNA-binding	52.7	9.9e-17	68	113	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++++E+ ++++++ lG++ W++Ia +++ gRt++++k++w+++l Kaladp0053s0590.1.p 68 RGKFSEDEERIIIHLHSVLGNK-WSRIATHLP-GRTDNEIKNFWNTHL 113 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 351 aa Download sequence
MGRSPLSFED DGLKKGPWTP EEDEKLVDFI NKNGHGSWRS LPKLAGLNRC GKSCRLRWTN 60 YLRPDIKRGK FSEDEERIII HLHSVLGNKW SRIATHLPGR TDNEIKNFWN THLRRKLLQM 120 GIDPTTHKPR TDYNNLLMNL TQLLATSNIA NLMSNNNNPW ENLSALRLQA DAAAQLAKAQ 180 LFQNLIQAMN ITNTQNTLGF GTSQDHTSLQ GLLHSNSGSH DTNNNNALSS KHQFVNSSET 240 PLTHQVCDEL QGVANSRAVS YQGGGLNPES GLSTNDNSPY YQVDLPALVT VSKDCSTSAN 300 QIETAKDHNL SSSYTFSSFS PTSSSFQSWA ELFDEEAIHN YSFIKDFLQQ *

Sequence ? help Back to Top

Protein Sequence Length: 351 aa Download sequence

MGRSPLSFED DGLKKGPWTP EEDEKLVDFI NKNGHGSWRS LPKLAGLNRC GKSCRLRWTN  60
YLRPDIKRGK FSEDEERIII HLHSVLGNKW SRIATHLPGR TDNEIKNFWN THLRRKLLQM  120
GIDPTTHKPR TDYNNLLMNL TQLLATSNIA NLMSNNNNPW ENLSALRLQA DAAAQLAKAQ  180
LFQNLIQAMN ITNTQNTLGF GTSQDHTSLQ GLLHSNSGSH DTNNNNALSS KHQFVNSSET  240
PLTHQVCDEL QGVANSRAVS YQGGGLNPES GLSTNDNSPY YQVDLPALVT VSKDCSTSAN  300
QIETAKDHNL SSSYTFSSFS PTSSSFQSWA ELFDEEAIHN YSFIKDFLQQ *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34670.1	1e-79	MYB family protein