PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0053s0587.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HSF
Protein Properties Length: 503aa    MW: 55455.6 Da    PI: 4.5269
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0053s0587.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind114.37.9e-36381282101
                          HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXX CS
         HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkk 91 
                          Fl k+y++++d++++ ++sws+ +nsfvv+++ ef +++LpkyFkh+nf+SFvRQLn+YgF+kv+ ++         weF+++ F +g+k
  Kaladp0053s0587.1.p  38 FLCKTYDMVDDPSTDAVVSWSSGNNSFVVWNPPEFGRDLLPKYFKHNNFSSFVRQLNTYGFRKVHPDR---------WEFANEGFLRGQK 118
                          9****************************************************************999.........************* PP

                          XXXXXXXXXX CS
         HSF_DNA-bind  92 ellekikrkk 101
                          +ll++ikr+k
  Kaladp0053s0587.1.p 119 HLLKTIKRRK 128
                          ********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 503 aa     Download sequence    
MSSSAERGIS GTCSTDSTQS VPVPVPVTMP NPNAPPPFLC KTYDMVDDPS TDAVVSWSSG  60
NNSFVVWNPP EFGRDLLPKY FKHNNFSSFV RQLNTYGFRK VHPDRWEFAN EGFLRGQKHL  120
LKTIKRRKAF HGPVQSQLEQ SQVQSPAASP CVEVGKFGLE EEVEMLKRDK NVLMQELVKL  180
RQQQQSTDKQ LQVTMDRLQG MEQRQQQLMS FLAKAVQSPG FLTQFVQQQA QNNRRISEAN  240
KKRRLKQDDD SMGDPSSNPG GQIVKYQPFL NEASTAFLRQ LMEVDSSSQL EFRNNDQDNF  300
FFGDASSSSD GQHGGSSMDR ASKPPLLEVL ASSPQFCSPP ASMAPACGSS ADSVDLQNSS  360
IGASSEVGTI IHHQPISSGK QDISRDIQYE AVPLVPDMVP ESFAENPVDD SIQFDASTFG  420
LDTELPFNIE SISPGHGTTD MSAYDDVWKM LSEEIDSAQL GGMANESEML LMDDDLDSSQ  480
NIDHLTDQMG LLSSGAKKND NI*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1121127LKTIKRR
2240247NKKRRLKQ
3241246KKRRLK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32330.11e-115HSF family protein