PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0053s0453.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

C2H2

Protein Properties

Length: 263aa MW: 29168.1 Da PI: 9.366

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0053s0453.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.3	2.8e-05	49	71	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++C++ F r nL+ H r+H Kaladp0053s0453.2.p 49 HICEICNQGFQRDQNLQMHRRRH 71 68********************9 PP
2	zf-C2H2	17.9	8.8e-06	126	148	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k + +s++k H++t+ Kaladp0053s0453.2.p 126 WVCGKCSKAYAVQSDYKAHLKTC 148 58*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 263 aa Download sequence
MLGKSRGAEN PFSSSLHEPT PCLENKDVSN STSSKRKRRP AGTPESDQHI CEICNQGFQR 60 DQNLQMHRRR HKVPWKLLKR ENPGQRKRVY VCPEPSCLHH NPSHALGDLV GIKKHFKRKH 120 SNLKEWVCGK CSKAYAVQSD YKAHLKTCGT RGHSCDCGRI FSKVESFIEH QDTCQVSCLM 180 SDKHIPSTKQ TILLSGTASS SGSASVHIPD HGAAPWLQAG SITEIGMIMK GNKDKIAADV 240 IGNGEYHNLE LQLSTTSTWY GQ*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	35	40	KRKRRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01940.1	2e-89	C2H2 family protein