PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0053s0453.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

C2H2

Protein Properties

Length: 278aa MW: 30747.9 Da PI: 9.0658

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0053s0453.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.2	3e-05	64	86	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++C++ F r nL+ H r+H Kaladp0053s0453.1.p 64 HICEICNQGFQRDQNLQMHRRRH 86 68********************9 PP
2	zf-C2H2	17.8	9.4e-06	141	163	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k + +s++k H++t+ Kaladp0053s0453.1.p 141 WVCGKCSKAYAVQSDYKAHLKTC 163 58*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 278 aa Download sequence
MLGKSRGAEN PFSSSLHEPT PCLENKDVSN STSSKRKRRP AGTPDPDAEV ISLSPKTLLE 60 SDQHICEICN QGFQRDQNLQ MHRRRHKVPW KLLKRENPGQ RKRVYVCPEP SCLHHNPSHA 120 LGDLVGIKKH FKRKHSNLKE WVCGKCSKAY AVQSDYKAHL KTCGTRGHSC DCGRIFSKVE 180 SFIEHQDTCQ VSCLMSDKHI PSTKQTILLS GTASSSGSAS VHIPDHGAAP WLQAGSITEI 240 GMIMKGNKDK IAADVIGNGE YHNLELQLST TSTWYGQ*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	35	40	KRKRRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01940.1	1e-104	C2H2 family protein