PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0053s0429.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB
Protein Properties Length: 313aa    MW: 34764.4 Da    PI: 7.8787
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0053s0429.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.61.2e-075397244
                         SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
      Myb_DNA-binding  2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                          +W+ eE + + +a + + ++   +W ++a++++ g+t  +++  +
  Kaladp0053s0429.2.p 53 SKWSHEENKMFENALAVYDKDspdRWQKVAAMIP-GKTVGDVVKQY 97
                         58********************************.***99998776 PP
2Myb_DNA-binding44.63.3e-14169213347
                          SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
      Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                          +WT+eE++l++ + k++G+g+W+ I+r +  +Rt+ q+ s+ qky
  Kaladp0053s0429.2.p 169 PWTEEEHKLFLLGLKKYGKGDWRNISRNFVITRTPTQVASHAQKY 213
                          8*****************************99************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MKFEMEAEME IRSSGSNPNL NSYGYPEDHH QQQQNQTQRR QHRKQYHQVE SSSKWSHEEN  60
KMFENALAVY DKDSPDRWQK VAAMIPGKTV GDVVKQYEEL EADVSSIEAG LVPVPGYTCP  120
AFTLDWAGGS GGGWSQSGEG FSHGYGGVNG GKRLASVRGL EQERKKGVPW TEEEHKLFLL  180
GLKKYGKGDW RNISRNFVIT RTPTQVASHA QKYFIRQLSG GKDKRRASIH DITTVNLNES  240
QTLSPDQLAR GQHSPDMPFQ WGNQASTGSG GSMDFNGAYG FNSGRSGMLD SYMGSQSLGA  300
FQMQSAMHYP QV*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.12e-82MYB family protein