PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0053s0103.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

Trihelix

Protein Properties

Length: 277aa MW: 30755.4 Da PI: 8.9581

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0053s0103.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	52.8	1e-16	18	109	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 +Wt++ + +L++a ++ +l+rg+l++++W+ev++++ ++++ r+ +qCk++++ ++k+yk +k++++ + s++p++d+l Kaladp0053s0103.2.p 18 CWTEEATSTLVDAWGKRYVELSRGNLRQKDWQEVADAVnarhgHSKKTFRTDVQCKNRIDTIKKKYKTEKARASASNGALASNWPFYDRL 107 8***********************************988877778889********************99888889*****9 PP trihelix 86 ea 87 +a Kaladp0053s0103.2.p 108 DA 109 85 PP

Sequence ? help Back to Top
Protein Sequence Length: 277 aa Download sequence
MDESSPPPSR PIPVREDCWT EEATSTLVDA WGKRYVELSR GNLRQKDWQE VADAVNARHG 60 HSKKTFRTDV QCKNRIDTIK KKYKTEKARA SASNGALASN WPFYDRLDAL IGPNVKKAVT 120 GGGGGGQVGT PPLPANRKAG PHASTLPKKR GAAAASMDDS YFRRNYSAVA AAAAAADLDE 180 PEDEEERMED EESERSRSSG DEEGDGDGIK KLAKAIKRFG EIYARVEGEK QRQMVELEKQ 240 RMQFAKELEV QRMQMFMNTQ VQLEKIKRSK GSDLYS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58630.1	2e-63	Trihelix family protein