PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0053s0103.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | Trihelix | ||||||||
Protein Properties | Length: 280aa MW: 31061.7 Da PI: 9.2048 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 52.8 | 1.1e-16 | 18 | 109 | 1 | 87 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 +Wt++ + +L++a ++ +l+rg+l++++W+ev++++ ++++ r+ +qCk++++ ++k+yk +k++++ + s++p++d+l Kaladp0053s0103.1.p 18 CWTEEATSTLVDAWGKRYVELSRGNLRQKDWQEVADAVnarhgHSKKTFRTDVQCKNRIDTIKKKYKTEKARASASNGALASNWPFYDRL 107 8*************************************988877778889************************99888889*******9 PP trihelix 86 ea 87 +a Kaladp0053s0103.1.p 108 DA 109 85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 280 aa Download sequence |
MDESSPPPSR PIPVREDCWT EEATSTLVDA WGKRYVELSR GNLRQKDWQE VADAVNARHG 60 HSKKTFRTDV QCKNRIDTIK KKYKTEKARA SASNGALASN WPFYDRLDAL IGPNVKKAVT 120 GGGGGGQVGT PPLPANRKAG PHASTLPKKR GAAAASMDDS YFRRNYSAVA AAAAAADLDE 180 PEDEEERMED EESERSRSSG DEEGDGDGIK KLAKAIKRFG EIYARVEGEK QRQMVELEKQ 240 RMQFAKELEV QRMQMFMNTQ VQLEKIKRSK GSGSNYLYS* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58630.1 | 2e-63 | Trihelix family protein |