PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0050s0318.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MYB | ||||||||
Protein Properties | Length: 274aa MW: 30365.4 Da PI: 6.9277 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 48.6 | 1.9e-15 | 22 | 69 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd l++++ G g+W+ a++ g++Rt+k+c++rw++yl Kaladp0050s0318.1.p 22 RGPWTVEEDTMLIHYISCNGDGRWNMLAKCAGLKRTGKSCRLRWLNYL 69 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 51.2 | 2.9e-16 | 75 | 118 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ +++E++l++++++++G++ W++Ia++++ gRt++++k++w++ Kaladp0050s0318.1.p 75 RGNLSPQEQLLILELHAKWGNR-WSKIAQHLP-GRTDNEIKNFWRT 118 7899******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 274 aa Download sequence |
MACKSSDGKG SMYEEDEAEL RRGPWTVEED TMLIHYISCN GDGRWNMLAK CAGLKRTGKS 60 CRLRWLNYLK PDVKRGNLSP QEQLLILELH AKWGNRWSKI AQHLPGRTDN EIKNFWRTRV 120 QKQALQLSLE TPDNQQIAAS AFSQSNSPAS SSAMSMSPRS NWHNTFGCNS VTPTLGESSS 180 SSLHHQTPTN PSNVAYGNNV CISSSSPFHH ENCYYVDNSQ AADAGGGFGS VDAGVTATSG 240 YVGRRNWVAD DEVENGMWNN TDELWQFRYS SSN* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68320.1 | 8e-69 | MYB family protein |