PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0050s0302.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

CO-like

Protein Properties

Length: 397aa MW: 43987.4 Da PI: 7.3208

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0050s0302.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	29.9	1.1e-09	14	57	3	40
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvv 40 +r C+ + +k+++++C ++ +lC++C ++ H+ H++v Kaladp0050s0302.2.p 14 ARACDSCVKKRARWYCAADDAFLCQSCDSSVHSAnslarrHERV 57 578*****************************657788888876 PP
2	CCT	68.4	1.9e-23	341	384	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 Rea+++RYkeKr+tR+F+KkirYe+RK +Ae+RpR+KGrFvk++ Kaladp0050s0302.2.p 341 REARVSRYKEKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRS 384 9*****************************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 397 aa Download sequence
MMKKMASAVG GKTARACDSC VKKRARWYCA ADDAFLCQSC DSSVHSANSL ARRHERVRLK 60 TASSFKLSAS DDFMASKSVP SWQRDVTRKP RTPRGKQSTP KSEYGSNPNP FSLVPELGVD 120 ETASVCESEE QLVYSRVPVY EPFVAELCTS ANSNEEGKFD RSLQSDEGNN SSVSDPPKTY 180 DVENFNGFLP SEMDLEEFAA DVESLLGKGL ENEPCGMEGL GLVEIVKEER STERDALELV 240 SFDYGCSANR FEDEAEDEDG ERKQTMKMVT TTTKLLRLDY EGVITAWAGQ RCPWAGGSRP 300 NMDPAHFWPS CMGGCGIEGH HPDAGRVPGM GHGGTLGDAE REARVSRYKE KRRTRLFSKK 360 IRYEVRKLNA EKRPRMKGRF VKRSALGVAP NTSLIR*

Sequence ? help Back to Top

Protein Sequence Length: 397 aa Download sequence

MMKKMASAVG GKTARACDSC VKKRARWYCA ADDAFLCQSC DSSVHSANSL ARRHERVRLK  60
TASSFKLSAS DDFMASKSVP SWQRDVTRKP RTPRGKQSTP KSEYGSNPNP FSLVPELGVD  120
ETASVCESEE QLVYSRVPVY EPFVAELCTS ANSNEEGKFD RSLQSDEGNN SSVSDPPKTY  180
DVENFNGFLP SEMDLEEFAA DVESLLGKGL ENEPCGMEGL GLVEIVKEER STERDALELV  240
SFDYGCSANR FEDEAEDEDG ERKQTMKMVT TTTKLLRLDY EGVITAWAGQ RCPWAGGSRP  300
NMDPAHFWPS CMGGCGIEGH HPDAGRVPGM GHGGTLGDAE REARVSRYKE KRRTRLFSKK  360
IRYEVRKLNA EKRPRMKGRF VKRSALGVAP NTSLIR*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	352	368	RRTRLFSKKIRYEVRKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68520.1	4e-99	CO-like family protein