PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0050s0291.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

C2H2

Protein Properties

Length: 328aa MW: 36966.3 Da PI: 7.7931

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0050s0291.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.1	3.2e-05	136	155	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++C+ C+k F+r n++ H+ Kaladp0050s0291.1.p 136 FVCSVCNKIFNRYNNMQMHM 155 89*****************9 PP
2	zf-C2H2	14.8	8.5e-05	221	243	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +Cgk F k + ++H +++ Kaladp0050s0291.1.p 221 FACRKCGKAFAVKGDWRTHEKNC 243 78*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 328 aa Download sequence
MQTHTFSNTT TTLSSFKTVT GCFGAGTESE DDDYHHSTLL TLGLPGQQYL PKSSTLKHHL 60 PLKPRTDDQT AHEDSKGSTT NNVTVALHIG QPAATIYDDM GTLVRADSRD MLDGQESGLQ 120 YWIPSPAQIL VGPAQFVCSV CNKIFNRYNN MQMHMWGHGS QFRKGPESLR GTKQASSFLR 180 LPCYCCSEGC RNHIDHPRAK PLKDFRTLQT HYKRKHGVKP FACRKCGKAF AVKGDWRTHE 240 KNCGKLWFCI CGSDFKHKRS LKDHIRAFGD GHGPHNDKLY SNSNENRGHN HNNDDLFEED 300 EEDEDEEDEV VHGFHKKHAH GKMAVMI*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13290.1	1e-113	C2H2 family protein